RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SPATA19Q7Z5L4 167 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PDZD3Q86UT5 571 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 LRRTM4Q86VH4 590 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 HPS6Q86YV9 775 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TRIML2Q8N7C3 387 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CDYL2Q8N8U2 506 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TMEM105Q8N8V8 129 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 KYQ8NBH2 561 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CADM4Q8NFZ8 388 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 OR2T11Q8NH01 316 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 RP9Q8TA86 221 aaKnown RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 FOXJ1Q92949 421 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 USP7Q93009 1102 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 FOPNLQ96NB1 174 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PRPF18Q99633 342 aaKnown RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 ORAI3Q9BRQ5 295 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 APOOQ9BUR5 198 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 OSBPL11Q9BXB4 747 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 RMI1Q9H9A7 625 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PALMDQ9NP74 551 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TBC1D23Q9NUY8 699 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 AIG1Q9NVV5 245 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 UBAP1Q9NZ09 502 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 STOX2Q9P2F5 926 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 RIMS3Q9UJD0 308 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 BTRCQ9Y297 605 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 GOLGA4Q13439 2230 aaKnown RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ATP6AP2A0A1C7CYW4 349 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 A0A1W2PPC4 97 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 METTL12A8MUP2 240 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CACNB4O00305 520 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 KMOO15229 486 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 LAMTOR5O43504 91 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PRAMEF4O60810 478 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 E2F6O75461 281 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CRCPO75575 148 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ATP6AP2O75787 350 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 BMP10O95393 424 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 C1orf105O95561 183 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 LINC00032P0C843 101 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ERGP11308 486 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TDGF1P13385 188 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ATP6V1B1P15313 513 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CD1EP15812 388 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 GPX3P22352 226 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 MAP4P27816 1152 aaKnown RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 IMPA1P29218 277 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 BDKRB1P46663 353 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ABRQ12979 859 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 GRIK2Q13002 908 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 FLOT2Q14254 428 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 NFE2L1Q14494 772 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CCDC92Q53HC0 331 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 TCHHL1Q5QJ38 904 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 IRAK1BP1Q5VVH5 260 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PRAMEF9Q5VWM5 478 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 METRNLQ641Q3 311 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CRTC3Q6UUV7 619 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 Q6ZSR9 355 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TRIM46Q7Z4K8 759 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 MILR1Q7Z6M3 343 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ABI3BPQ7Z7G0 1075 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 AMZ2Q86W34 360 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 SNX32Q86XE0 403 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 C1orf210Q8IVY1 113 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 DDIASQ8IXT1 998 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CFAP206Q8IYR0 622 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 MAML2Q8IZL2 1156 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 DEFB119Q8N690 84 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 EFCAB3Q8N7B9 438 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 SKA2Q8WVK7 121 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 SNX19Q92543 992 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 MARK4Q96L34 752 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 MAGEB10Q96LZ2 347 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 CNBD2Q96M20 576 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CDK15Q96Q40 435 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TIMM29Q9BSF4 260 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ZDHHC5Q9C0B5 715 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 SDR39U1Q9NRG7 319 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 PNPLA3Q9NST1 481 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 DNAJC11Q9NVH1 559 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 RIC8BQ9NVN3 520 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TMEM45AQ9NWC5 275 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 SLC23A2Q9UGH3 650 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 SLC17A4Q9Y2C5 497 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 MYRFQ9Y2G1 1151 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ANGPTL3Q9Y5C1 460 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 HS3ST3A1Q9Y663 406 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 KRT87PA6NCN2 255 aa8.55□□□□□ -1.04
DDB1-213ENST00000539332 PABPN1LA6NDY0 278 aaKnown RBP8.55□□□□□ -1.04
DDB1-213ENST00000539332 PSMD12O00232 456 aaPredicted RBP8.55□□□□□ -1.04
DDB1-213ENST00000539332 LSM1O15116 133 aaKnown RBP8.55□□□□□ -1.04
DDB1-213ENST00000539332 H6PDO95479 791 aa8.55□□□□□ -1.04
DDB1-213ENST00000539332 SLC16A8O95907 504 aa8.55□□□□□ -1.04
DDB1-213ENST00000539332 FUCA1P04066 466 aa8.55□□□□□ -1.04
DDB1-213ENST00000539332 CEACAM5P06731 702 aa8.55□□□□□ -1.04
DDB1-213ENST00000539332 BCKDHBP21953 392 aa8.55□□□□□ -1.04
DDB1-213ENST00000539332 HMOX2P30519 316 aa8.55□□□□□ -1.04
DDB1-213ENST00000539332 CASP2P42575 452 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms