RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828		H0YGG7	62 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	WISP3	O95389	354 aa	Predicted RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	F7	P08709	466 aa	Predicted RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ALAS2	P22557	587 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SSTR1	P30872	391 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SPR	P35270	261 aa	Predicted RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SLC26A3	P40879	764 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MAGEA4	P43358	317 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SLC12A2	P55011	1212 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TAS2R39	P59534	338 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ARF3	P61204	181 aa	Predicted RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	RPS18	P62269	152 aa	Known RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TBPL1	P62380	186 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NDUFA9	Q16795	377 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PHKG1	Q16816	387 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PPP1R3A	Q16821	1122 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	LACTB2	Q53H82	288 aa	Predicted RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GRTP1	Q5TC63	336 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	THEMIS2	Q5TEJ8	643 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MLIP	Q5VWP3	458 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	FRMPD2B	Q6IN97	320 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ZDHHC24	Q6UX98	284 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TTLL10	Q6ZVT0	673 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	C17orf64	Q86WR6	236 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	KLHDC8A	Q8IYD2	350 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CNPY4	Q8N129	248 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ARHGEF39	Q8N4T4	335 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	OR4K1	Q8NGD4	311 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	RERG	Q96A58	199 aa	Predicted RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ABHD17A	Q96GS6	310 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	FER1L6-AS2	Q96M78	137 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	RBBP8	Q99708	897 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ACAT2	Q9BWD1	397 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	DERL2	Q9GZP9	239 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	LRRC4C	Q9HCJ2	640 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ZDHHC18	Q9NUE0	388 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ARL15	Q9NXU5	204 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SLC17A6	Q9P2U8	582 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TSR3	Q9UJK0	312 aa	Known RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ADAMTS6	Q9UKP5	1117 aa		11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	G3BP2	Q9UN86	482 aa	Known RBP	11.75	□□□□□ -0.53
CLTCL1-205	ENST00000538828	LOC105369274	A0A096LPK9	316 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	LOC102723532	A0A0G2JNH3	316 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SUV39H1	O43463	412 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CTSB	P07858	339 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NPPB	P16860	134 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MMP11	P24347	488 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GRK3	P35626	688 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GPX6	P59796	221 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ATP6V0D1	P61421	351 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NAE1	Q13564	534 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NKG7	Q16617	165 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ATP1A1-AS1	Q5TC04	95 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NIPAL1	Q6NVV3	410 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TMEM207	Q6UWW9	146 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	OR4N4	Q8N0Y3	316 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CSNK1A1L	Q8N752	337 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PPFIBP2	Q8ND30	876 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	KIF18A	Q8NI77	898 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	LRRC1	Q9BTT6	524 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	FUT8	Q9BYC5	575 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TGIF2	Q9GZN2	237 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ING2	Q9H160	280 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GPAM	Q9HCL2	828 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ZNF304	Q9HCX3	659 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ACSS2	Q9NR19	701 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SMYD2	Q9NRG4	433 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SEMA3G	Q9NS98	782 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TLK1	Q9UKI8	766 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PTRH2	Q9Y3E5	179 aa	Known RBP	11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	OARD1	Q9Y530	152 aa		11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GCN1	Q92616	2671 aa	Known RBP	11.74	□□□□□ -0.53
CLTCL1-205	ENST00000538828		A0A1W2PQ72	361 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CTAGE15	A4D2H0	777 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828		H0YIG0	161 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828		H7BY64	318 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PEX12	O00623	359 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ANXA5	P08758	320 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CTAGE8	P0CG41	777 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	STMN1	P16949	149 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	YBX1	P67809	324 aa	Known RBP	11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CSNK1G2	P78368	415 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MRPS25	P82663	173 aa	Known RBP	11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NFATC3	Q12968	1075 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	DSG2	Q14126	1118 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	C1orf189	Q5VU69	101 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ATG14	Q6ZNE5	492 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	COX15	Q7KZN9	410 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MRGPRE	Q86SM8	312 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CTAGE6	Q86UF2	777 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CTAGE4	Q8IX94	777 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TCAIM	Q8N3R3	496 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TBC1D19	Q8N5T2	526 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CAMKV	Q8NCB2	501 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TM4SF19	Q96DZ7	209 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SEC16B	Q96JE7	1060 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	UBXN10	Q96LJ8	280 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	C10orf90	Q96M02	699 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms