RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 GJA1P17302 382 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 EFNA1P20827 205 aaPredicted RBP13.87□□□□□ -0.19
USP44-203ENST00000537435 CCR3P51677 355 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 ZDHHC20Q5W0Z9 365 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 CCDC81Q6ZN84 652 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 CBLL1Q75N03 491 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 EIF3MQ7L2H7 374 aaKnown RBP13.87□□□□□ -0.19
USP44-203ENST00000537435 BTLAQ7Z6A9 289 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 ELMO1Q92556 727 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 ZNF558Q96NG5 402 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 MTERF1Q99551 399 aaKnown RBP13.87□□□□□ -0.19
USP44-203ENST00000537435 APOL4Q9BPW4 351 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 RHNO1Q9BSD3 238 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 PCDH12Q9NPG4 1184 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 VPS29Q9UBQ0 182 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 FAM8A1Q9UBU6 413 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 HS3ST2Q9Y278 367 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 SH3GLB1Q9Y371 365 aa13.87□□□□□ -0.19
USP44-203ENST00000537435 CLDN25C9JDP6 229 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 TOR1BO14657 336 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 YY2O15391 372 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 PRMT3O60678 531 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 PARNO95453 639 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 EPHA2P29317 976 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 HOXA9P31269 272 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 MASP1P48740 699 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 CXCR4P61073 352 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 ABRQ12979 859 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 CSTF3Q12996 717 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 SMN1Q16637 294 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 XKR6Q5GH73 641 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 LIPJQ5W064 366 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 GPR155Q7Z3F1 870 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 ZNF540Q8NDQ6 660 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 SCAMP4Q969E2 229 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 LMLNQ96KR4 655 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 FAM120CQ9NX05 1096 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 KIF17Q9P2E2 1029 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 NDRG4Q9ULP0 352 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 JRKO75564 520 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 MT-ND2P03891 347 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 LAMP1P11279 417 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 ACVR2AP27037 513 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 ALDH4A1P30038 563 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 CD97P48960 835 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 SLC7A9P82251 487 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 ZNF846Q147U1 533 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 ADPRMQ3LIE5 342 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 EGFLAMQ63HQ2 1017 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 PDE12Q6L8Q7 609 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 TMCO2Q7Z6W1 182 aaPredicted RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 ATG16L2Q8NAA4 619 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 CHST14Q8NCH0 376 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 OR8J2Q8NGG1 315 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 WDR20Q8TBZ3 569 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 MAGEB10Q96LZ2 347 aaPredicted RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 CPEB1Q9BZB8 566 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 ASPSCR1Q9BZE9 553 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 SMG9Q9H0W8 520 aaKnown RBP13.86□□□□□ -0.19
USP44-203ENST00000537435 REEP1Q9H902 201 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 KRT84Q9NSB2 600 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 SLCO3A1Q9UIG8 710 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 BTBD3Q9Y2F9 522 aa13.86□□□□□ -0.19
USP44-203ENST00000537435 E7EQ34 232 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 SLC22A1O15245 554 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 POP4O95707 220 aaKnown RBP13.85□□□□□ -0.19
USP44-203ENST00000537435 FADS2O95864 444 aaKnown RBP13.85□□□□□ -0.19
USP44-203ENST00000537435 PSMB9P28065 219 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 BCAP31P51572 246 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 DGCR6Q14129 220 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 MAD2L1BPQ15013 274 aaPredicted RBP13.85□□□□□ -0.19
USP44-203ENST00000537435 NDNFQ8TB73 568 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 GLMNQ92990 594 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 SH3KBP1Q96B97 665 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 YIPF6Q96EC8 236 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 TPD52L3Q96J77 140 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 BCL7BQ9BQE9 202 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 TPT1P8Q9HAU6 139 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 THUMPD1Q9NXG2 353 aaKnown RBP13.85□□□□□ -0.19
USP44-203ENST00000537435 RUVBL1Q9Y265 456 aaKnown RBP13.85□□□□□ -0.19
USP44-203ENST00000537435 NUP214P35658 2090 aaPredicted RBP13.85□□□□□ -0.19
USP44-203ENST00000537435 M0R3G1 203 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 LEFTY2O00292 366 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 TEX28O15482 410 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 UGDHO60701 494 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 FAM20BO75063 409 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 KCNC4Q03721 635 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 RELAQ04206 551 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 ACSM2AQ08AH3 577 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 DOC2AQ14183 400 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 CLCA4Q14CN2 919 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 SYT6Q5T7P8 510 aaPredicted RBP13.85□□□□□ -0.19
USP44-203ENST00000537435 KIAA1614Q5VZ46 1190 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 ACSM2BQ68CK6 577 aa13.85□□□□□ -0.19
USP44-203ENST00000537435 FAM43BQ6ZT52 329 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms