RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 B3GNT6Q6ZMB0 384 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 HEATR4Q86WZ0 1026 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SLC35F3Q8IY50 421 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 ZCCHC10Q8TBK6 192 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SPATA18Q8TC71 538 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 C2orf15Q8WU43 125 aaKnown RBP5.26□□□□□ -1.57
CLIP1-207ENST00000536634 KLHL15Q96M94 604 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SLITRK1Q96PX8 696 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 ACOX2Q99424 681 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 FAM124BQ9H5Z6 455 aaPredicted RBP5.26□□□□□ -1.57
CLIP1-207ENST00000536634 RETREG1Q9H6L5 497 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 PLEKHA5Q9HAU0 1116 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 MAGEE1Q9HCI5 957 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SLCO3A1Q9UIG8 710 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 FAM96BQ9Y3D0 163 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 LSM4Q9Y4Z0 139 aaKnown RBP5.26□□□□□ -1.57
CLIP1-207ENST00000536634 SNX9Q9Y5X1 595 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 FBN2P35556 2912 aa5.26□□□□□ -1.57
CLIP1-207ENST00000536634 NDUFS7O75251 213 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 MTA2O94776 668 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 ADRB2P07550 413 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 CLTAP09496 248 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 ZNF883P0CG24 379 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 COX7A2P14406 83 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 DAOP14920 347 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 GNSP15586 552 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 ACAT1P24752 427 aaKnown RBP5.25□□□□□ -1.57
CLIP1-207ENST00000536634 EIF2DP41214 584 aaKnown RBP5.25□□□□□ -1.57
CLIP1-207ENST00000536634 MATKP42679 507 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 TNFRSF4P43489 277 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 PEX5P50542 639 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 LY6DQ14210 128 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 FAM76BQ5HYJ3 339 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 NAA35Q5VZE5 725 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 ESX1Q8N693 406 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 TMEM161BQ8NDZ6 487 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 CREB3L4Q8TEY5 395 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 DNASE2BQ8WZ79 361 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 NXPE2Q96DL1 559 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 ZNF274Q96GC6 653 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-207ENST00000536634 PKMYT1Q99640 499 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 TRIM9Q9C026 710 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 TKTL2Q9H0I9 626 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 ESRP2Q9H6T0 727 aaKnown RBP5.25□□□□□ -1.57
CLIP1-207ENST00000536634 UXTQ9UBK9 157 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-207ENST00000536634 CPQQ9Y646 472 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 CELSR2Q9HCU4 2923 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 ITPR3Q14573 2671 aa5.25□□□□□ -1.57
CLIP1-207ENST00000536634 MEI4A8MW99 385 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 E9PAM4 449 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 E9PMD0 336 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 CLDN3O15551 220 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 FLRT2O43155 660 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 TNFSF14O43557 240 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 ZNF217O75362 1048 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 CLDN14O95500 239 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 PMS2P2O95744 297 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 MT-CYBP00156 380 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 TFP02787 698 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 MMP2P08253 660 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 CYC1P08574 325 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 SNRNP70P08621 437 aaKnown RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 FDPSP14324 419 aaKnown RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 CCT6AP40227 531 aaKnown RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 MATR3P43243 847 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 IL9RQ01113 521 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 CCDC173Q0VFZ6 552 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 SMARCB1Q12824 385 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 PDIA5Q14554 519 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 TMEM132DQ14C87 1099 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 BAK1Q16611 211 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 AMZ1Q400G9 498 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 TAF1BQ53T94 588 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 KCNT1Q5JUK3 1230 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 LCTLQ6UWM7 567 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 C1orf186Q6ZWK4 172 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 RUFY3Q7L099 469 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 RRM2BQ7LG56 351 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 METTL23Q86XA0 190 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 THEM5Q8N1Q8 247 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 SCCPDHQ8NBX0 429 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 NOC3LQ8WTT2 800 aaKnown RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 RND1Q92730 232 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 MTBPQ96DY7 904 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 BICD1Q96G01 975 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 ZNF570Q96NI8 536 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 DUX5Q96PT3 197 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 PKP4Q99569 1192 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 MMTAG2Q9BU76 263 aaKnown RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 TRIM4Q9C037 500 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 RPF1Q9H9Y2 349 aaKnown RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 DDX19AQ9NUU7 478 aaKnown RBP5.24□□□□□ -1.57
CLIP1-207ENST00000536634 PPP1R14DQ9NXH3 145 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 CSMD2Q7Z408 3487 aa5.24□□□□□ -1.57
CLIP1-207ENST00000536634 CKAP5Q14008 2032 aa5.23□□□□□ -1.57
CLIP1-207ENST00000536634 CELSR1Q9NYQ6 3014 aa5.23□□□□□ -1.57
CLIP1-207ENST00000536634 SAA2-SAA4A0A096LPE2 208 aa5.23□□□□□ -1.57
CLIP1-207ENST00000536634 A0A1W2PQM1 296 aa5.23□□□□□ -1.57
CLIP1-207ENST00000536634 ZNF840PA6NDX5 716 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms