RNA–Protein interactions for RNA: ENST00000536445.5

POLE-209, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-209	ENST00000536445	AFMID	Q63HM1	303 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	RANBP10	Q6VN20	620 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	ZNF438	Q7Z4V0	828 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	ADAMTSL2	Q86TH1	951 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	NOXA1	Q86UR1	476 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	FAM109A	Q8N4B1	249 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	CARNMT1	Q8N4J0	409 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	PAF1	Q8N7H5	531 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	LSM14A	Q8ND56	463 aa	Known RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	FAM162A	Q96A26	154 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	RHBDF1	Q96CC6	855 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	MRPL38	Q96DV4	380 aa	Known RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	RNF170	Q96K19	258 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	COQ7	Q99807	217 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	SP110	Q9HB58	689 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	KCNN3	Q9UGI6	736 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	FBXO10	Q9UK96	956 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TRAPPC4	Q9Y296	219 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	AP3M1	Q9Y2T2	418 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	GMPPB	Q9Y5P6	360 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	UGT2B17	O75795	530 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	PAPSS2	O95340	614 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	LCK	P06239	509 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	LIPA	P38571	399 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	RPS5	P46782	204 aa	Known RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	MAPKAPK2	P49137	400 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	UGT2B15	P54855	530 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	SMU1	Q2TAY7	513 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TBRG1	Q3YBR2	411 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	NXNL2	Q5VZ03	156 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	IL31	Q6EBC2	164 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	IDO2	Q6ZQW0	420 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TMEM179B	Q7Z7N9	219 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	CADM2	Q8N3J6	435 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TBC1D20	Q96BZ9	403 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TTYH2	Q9BSA4	534 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TFB2M	Q9H5Q4	396 aa	Known RBP	13.62	□□□□□ -0.23
POLE-209	ENST00000536445	C12orf10	Q9HB07	376 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	POPDC3	Q9HBV1	291 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	TDP1	Q9NUW8	608 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	ACOXL	Q9NUZ1	547 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	PKP3	Q9Y446	797 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	PCDHGB2	Q9Y5G2	931 aa		13.62	□□□□□ -0.23
POLE-209	ENST00000536445	SZT2	Q5T011	3432 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	KRT87P	A6NCN2	255 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	ZNF197	O14709	1029 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	POLR1C	O15160	346 aa	Predicted RBP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	MATN3	O15232	486 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	LINC01565	O15544	149 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	CLDN11	O75508	207 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	CYP2A7	P20853	494 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	FDXR	P22570	491 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	SOX6	P35712	828 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	ARHGDIA	P52565	204 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	GBX1	Q14549	363 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	TBCE	Q15813	527 aa	Predicted RBP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	PRSS36	Q5K4E3	855 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	ANKS6	Q68DC2	871 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445		Q6ZNB5	142 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	HTR3D	Q70Z44	454 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	CCDC190	Q86UF4	302 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	GRAMD2A	Q8IUY3	354 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	LSMEM1	Q8N8F7	131 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	FLCN	Q8NFG4	579 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	OR7D4	Q8NG98	312 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	PYCR2	Q96C36	320 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	ATOH8	Q96SQ7	321 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	RIBC2	Q9H4K1	309 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	TRIM39	Q9HCM9	518 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	ITM2B	Q9Y287	266 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	BOLA1	Q9Y3E2	137 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	TNRC18	O15417	2968 aa	Predicted RBP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	MYLK	Q15746	1914 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	ANAPC1	Q9H1A4	1944 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445		A0A1B0GVM2	712 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	ELOVL7	A1L3X0	281 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	PRAMEF12	O95522	483 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	RHOC	P08134	193 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	DDX6	P26196	483 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	OR3A3	P47888	321 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	SIM2	Q14190	667 aa	Predicted RBP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	SYT16	Q17RD7	645 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	C5orf22	Q49AR2	442 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	BCL7A	Q4VC05	210 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	TCEAL5	Q5H9L2	206 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	CCNJ	Q5T5M9	372 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	TIGD7	Q6NT04	549 aa	Predicted RBP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	FNDC5	Q8NAU1	212 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	DMRTB1	Q96MA1	342 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	SFXN1	Q9H9B4	322 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	HEBP1	Q9NRV9	189 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	PLSCR3	Q9NRY6	295 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	DCAF13	Q9NV06	445 aa	Known RBP	13.61	□□□□□ -0.23
POLE-209	ENST00000536445	STOML2	Q9UJZ1	356 aa		13.61	□□□□□ -0.23
POLE-209	ENST00000536445	NDRG4	Q9ULP0	352 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms