RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PCDHB8Q9UN66 801 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 PCDHB1Q9Y5F3 818 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 NUMA1Q14980 2115 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 OR2AG2A6NM03 316 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 H3BM21 787 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 DYRK3O43781 588 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 TPST2O60704 377 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 CLDN11O75508 207 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 RETP07949 1114 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 KRR1Q13601 381 aaKnown RBP15.43■□□□□ 0.06
MCF2L-232ENST00000535094 TEX26Q8N6G2 289 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 KCNH6Q9H252 994 aa15.43■□□□□ 0.06
MCF2L-232ENST00000535094 RPRD1BQ9NQG5 326 aaKnown RBP15.43■□□□□ 0.06
MCF2L-232ENST00000535094 RLFQ13129 1914 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 GON4LQ3T8J9 2241 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 SSX4O60224 188 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 GATMP50440 423 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 RAB25P57735 213 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 FAM110CQ1W6H9 321 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 SYTL3Q4VX76 610 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 HECTD3Q5T447 861 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 FAM131AQ6UXB0 335 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 PRSS48Q7RTY5 328 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 SLC5A8Q8N695 610 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 DYRK4Q9NR20 520 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 PAQR5Q9NXK6 330 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 TRPM5Q9NZQ8 1165 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 MIA3Q5JRA6 1907 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 C5orf58C9J3I9 102 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 PCMT1P22061 227 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 XPAP23025 273 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 FEN1P39748 380 aaKnown RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 EIF2DP41214 584 aaKnown RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 SMAD3P84022 425 aaKnown RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 IL18R1Q13478 541 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 STARD3Q14849 445 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 CPTPQ5TA50 214 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 AFMIDQ63HM1 303 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 LAIR2Q6ISS4 152 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 ZNF467Q7Z7K2 595 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 GALNT7Q86SF2 657 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 TSPYL5Q86VY4 417 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 C2orf73Q8N5S3 287 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-232ENST00000535094 OR9Q2Q8NGE9 314 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 OR4A15Q8NGL6 344 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 TMEM246Q9BRR3 403 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 CTPS2Q9NRF8 586 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 UGT2A1Q9Y4X1 527 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 PCDHGB6Q9Y5F9 930 aa15.42■□□□□ 0.06
MCF2L-232ENST00000535094 NUAK1O60285 661 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 PRLP01236 227 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 C9P02748 559 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 ALDH2P05091 517 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 SGSHP51688 502 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 RACK1P63244 317 aaKnown RBP15.41■□□□□ 0.06
MCF2L-232ENST00000535094 NAE1Q13564 534 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 DGKKQ5KSL6 1271 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 GALNT12Q8IXK2 581 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 C17orf50Q8WW18 174 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 NOTOA8MTQ0 251 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 M0QX08 132 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 TAPBPO15533 448 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 AP2A2O94973 939 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 FHP07954 510 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 ANXA4P09525 319 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-232ENST00000535094 IFI30P13284 250 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 SDC1P18827 310 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 OR1D2P34982 312 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 ALDH9A1P49189 494 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 CDH4P55283 916 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 NOXRED1Q6NXP6 359 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 RAB43Q86YS6 212 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 MGME1Q9BQP7 344 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 GPR62Q9BZJ7 368 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 IL1RAPQ9NPH3 570 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 THG1LQ9NWX6 298 aaKnown RBP15.41■□□□□ 0.06
MCF2L-232ENST00000535094 AP3M1Q9Y2T2 418 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 PEX16Q9Y5Y5 336 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 CNTRLQ7Z7A1 2325 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 WASH4PA8MWX3 477 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 FAM47E-STBD1D6RA91 191 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 SLC10A3P09131 477 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 LAMP1P11279 417 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 CDC42P60953 191 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 PCBP2Q15366 365 aaKnown RBP eCLIP15.41■□□□□ 0.063e-8■■■■■ 33.9
MCF2L-232ENST00000535094 BCL7AQ4VC05 210 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 MFSD14CQ5VZR4 134 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 LAIR1Q6GTX8 287 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 TMPRSS11AQ6ZMR5 421 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 C11orf96Q7Z7L8 435 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 PIH1D2Q8WWB5 315 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 IPCEF1Q8WWN9 437 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-232ENST00000535094 VMP1Q96GC9 406 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 ZNF300Q96RE9 604 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-232ENST00000535094 GFM1Q96RP9 751 aaKnown RBP15.41■□□□□ 0.06
MCF2L-232ENST00000535094 PKP4Q99569 1192 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 ACSL6Q9UKU0 697 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 DOCK3Q8IZD9 2030 aa15.41■□□□□ 0.06
MCF2L-232ENST00000535094 FAM220BPB1ANY3 271 aa15.4■□□□□ 0.06
MCF2L-232ENST00000535094 B4GALT3O60512 393 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms