RNA–Protein interactions for RNA: ENST00000533059.5

CHID1-222, Transcript of chitinase domain containing 1, human

TSL 3

Gene CHID1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHID1-222	ENST00000533059	ZNF425	Q6IV72	752 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	CSNK1A1L	Q8N752	337 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	ENDOV	Q8N8Q3	282 aa	Known RBP	13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC38A9	Q8NBW4	561 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	OR56A3	Q8NH54	315 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC44A1	Q8WWI5	657 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	SGPP1	Q9BX95	441 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	VPS11	Q9H270	941 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	ALG9	Q9H6U8	611 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	CNOT10	Q9H9A5	744 aa	Known RBP	13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	TMEM184C	Q9NVA4	438 aa		13.24	□□□□□ -0.29
CHID1-222	ENST00000533059	FARSA	Q9Y285	508 aa	Known RBP	13.24	□□□□□ -0.29
CHID1-222	ENST00000533059		A0A096LPK6	155 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	IGKV1-8	A0A0C4DH67	115 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	HYKK	A2RU49	373 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	CDC14C	A4D256	554 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059		H0YGG7	62 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	ERVH48-1	M5A8F1	160 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	DSCR3	O14972	297 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	RIPK2	O43353	540 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	CREG1	O75629	220 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	SLU7	O95391	586 aa	Known RBP	13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	ABHD2	P08910	425 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	CD63	P08962	238 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	RAB40AL	P0C0E4	278 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC35E2B	P0CK96	405 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	TFEB	P19484	476 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	F8A1	P23610	371 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	CCR8	P51685	355 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	ARF3	P61204	181 aa	Predicted RBP	13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	RPS18	P62269	152 aa	Known RBP	13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC9A5	Q14940	896 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	NCF4	Q15080	339 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	NDUFA9	Q16795	377 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	MUM1	Q2TAK8	710 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	TMPRSS11B	Q86T26	416 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	SYVN1	Q86TM6	617 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	PLD3	Q8IV08	490 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	METTL27	Q8N6F8	245 aa	Predicted RBP	13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	STAG3L4	Q8TBR4	150 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	SNRNP27	Q8WVK2	155 aa	Known RBP	13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC5A11	Q8WWX8	675 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	KIAA1191	Q96A73	305 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	CCDC77	Q9BR77	488 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	DHRS4	Q9BTZ2	278 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	FUT8	Q9BYC5	575 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	PCDHGA6	Q9Y5G7	932 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	KCNE2	Q9Y6J6	123 aa		13.23	□□□□□ -0.29
CHID1-222	ENST00000533059	LOC105369274	A0A096LPK9	316 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	LOC102723532	A0A0G2JNH3	316 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	SYCE1L	A8MT33	242 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059		H3BMH7	237 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	NKX2-8	O15522	239 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	PRPF4	O43172	522 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	C2	P06681	752 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	FAM153B	P0C7A2	387 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC26A3	P40879	764 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	OR4D1	Q15615	310 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	FAM153C	Q494X1	144 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	SULT1C3	Q6IMI6	304 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	FBXO42	Q6P3S6	717 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	BORA	Q6PGQ7	559 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	FAM198B	Q6UWH4	519 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	THOC6	Q86W42	341 aa	Known RBP	13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	OR4N4	Q8N0Y3	316 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	EIF1AD	Q8N9N8	165 aa	Known RBP	13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	SNX31	Q8N9S9	440 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	KCTD4	Q8WVF5	259 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	COL26A1	Q96A83	441 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	GBP5	Q96PP8	586 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	RUFY1	Q96T51	708 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	FAM117A	Q9C073	453 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	NUDT4	Q9NZJ9	180 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC22A14	Q9Y267	594 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	LAMA5	O15230	3695 aa		13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	URB1	O60287	2271 aa	Known RBP	13.22	□□□□□ -0.29
CHID1-222	ENST00000533059	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	FEZF1	A0PJY2	475 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	CCNT2	O60583	730 aa	Known RBP	13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	KERA	O60938	352 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	IPO13	O94829	963 aa	Known RBP	13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	WISP3	O95389	354 aa	Predicted RBP	13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	ITGB2	P05107	769 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	SERPIND1	P05546	499 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	SLC35G6	P0C7Q6	338 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	NPPB	P16860	134 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	FOLR3	P41439	243 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	GLRB	P48167	497 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	CSNK1G2	P78368	415 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	IRF9	Q00978	393 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	RELA	Q04206	551 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	DEFB109B	Q30KR1	87 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	NKAIN1	Q4KMZ8	207 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	ATP1A1-AS1	Q5TC04	95 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	LCN10	Q6JVE6	187 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	PRMT9	Q6P2P2	845 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	CAMKV	Q8NCB2	501 aa		13.21	□□□□□ -0.29
CHID1-222	ENST00000533059	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.21	□□□□□ -0.29

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