RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 HGSO14964 777 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TNFSF15O95150 251 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 NDUFS1P28331 727 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 SDHAP31040 664 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ATP6V1E1P36543 226 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 MAGEA3P43357 314 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PREPP48147 710 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ARCN1P48444 511 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 LIMK2P53671 638 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 NKX6-1P78426 367 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PLOD1Q02809 727 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 CFHR1Q03591 330 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 CKAP4Q07065 602 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 C2orf54Q08AI8 447 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 RPA4Q13156 261 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TRA2AQ13595 282 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 THOC5Q13769 683 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 BOP1Q14137 746 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ERV3-1Q14264 604 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 MORF4L2Q15014 288 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TBC1D25Q3MII6 688 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ANKRD20A4Q4UJ75 823 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 DNAJC21Q5F1R6 531 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PTRHD1Q6GMV3 140 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 CAPRIN2Q6IMN6 1127 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 NEPROQ6NW34 567 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 DUS1LQ6P1R4 473 aaKnown RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 KLHL35Q6PF15 583 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 FAM180AQ6UWF9 173 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF574Q6ZN55 896 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 CHSY3Q70JA7 882 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMEM135Q86UB9 458 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 LRRC6Q86X45 466 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PROSER1Q86XN7 944 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PLXDC1Q8IUK5 500 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PDIK1LQ8N165 341 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 FBXO39Q8N4B4 442 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 LILRA3Q8N6C8 439 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 BBOF1Q8ND07 529 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 AGBL5Q8NDL9 886 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 GPR150Q8NGU9 434 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TSPEARQ8WU66 669 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZFPM2Q8WW38 1151 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 EDARADDQ8WWZ3 215 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ELMO1Q92556 727 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 FGF11Q92914 225 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZDHHC12Q96GR4 267 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 SNF8Q96H20 258 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 SIGLEC10Q96LC7 697 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 RMDN2Q96LZ7 410 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF578Q96N58 590 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC46A1Q96NT5 459 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 KCNC2Q96PR1 638 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PANX3Q96QZ0 392 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TRIM51Q9BSJ1 452 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC12A9Q9BXP2 914 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMPRSS13Q9BYE2 586 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TRIM31Q9BZY9 425 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 CDIP1Q9H305 208 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 NECTIN3Q9NQS3 549 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 THSD1Q9NS62 852 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 C20orf96Q9NUD7 363 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMEM9Q9P0T7 183 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 PISDQ9UG56 409 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC24A2Q9UI40 661 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 GNPTGQ9UJJ9 305 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 RAXQ9Y2V3 346 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 HEBP2Q9Y5Z4 205 aa5.61□□□□□ -1.51
HMGB1P42-201ENST00000532126 ARID1BQ8NFD5 2236 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TDRD6O60522 2096 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SCN8AQ9UQD0 1980 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZCWPW2A0A1B0GU75 182 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 UBA6A0AVT1 1052 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 PMS2P1A4D2B8 440 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 MEGF11A6BM72 1044 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SRRM3A6NNA2 597 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 IQCF5A8MTL0 148 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 A8MU76 341 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 FAM171A2A8MVW0 826 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 H3BMM5 538 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TAF4O00268 1085 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 PRMT5O14744 637 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 NDC80O14777 642 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TOX3O15405 576 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 RRP8O43159 456 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 DOK2O60496 412 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 NPHS1O60500 1241 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 DEAF1O75398 565 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 RASSF9O75901 435 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 FAM155BO75949 473 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 USP1O94782 785 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SEC31AO94979 1220 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 HSPA4LO95757 839 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SCGB1D1O95968 90 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ESR1P03372 595 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TUBB4AP04350 444 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ANXA2P07355 339 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ITGA2BP08514 1039 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms