RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ZNF275Q9NSD4 429 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 MRPL22Q9NWU5 206 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 RNF14Q9UBS8 474 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 RNF150Q9ULK6 438 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 PCDHA12Q9UN75 941 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 SH3GLB1Q9Y371 365 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 RHBDD3Q9Y3P4 386 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 KDM6BO15054 1643 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 RAPGEF6Q8TEU7 1601 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 CDK13Q14004 1512 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 KIAA0586Q9BVV6 1533 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 KIF15Q9NS87 1388 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF541Q9H0D2 1346 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 DUXAA6NLW8 204 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 FFAR3O14843 346 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 GPR42O15529 346 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 PRAMEF11O60813 436 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 RETP07949 1114 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 TCN1P20061 433 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 OR1D2P34982 312 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 FMO5P49326 533 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 CLCN7P51798 805 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 YWHAGP61981 247 aaKnown RBP eCLIP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 POLR2LP62875 67 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 CSNK2A1P68400 391 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 ENPEPQ07075 957 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 E2F2Q14209 437 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 SELPLGQ14242 412 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 UBXN2BQ14CS0 331 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 NKPD1Q17RQ9 610 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 ALKBH6Q3KRA9 238 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 WDR72Q3MJ13 1102 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 FAM174BQ3ZCQ3 159 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 PAGE2BQ5JRK9 111 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 TRPM8Q7Z2W7 1104 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 NEK8Q86SG6 692 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 NELFCDQ8IXH7 590 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 DTX3Q8N9I9 347 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 CSNK2A3Q8NEV1 391 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 RAB40CQ96S21 281 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 FEVQ99581 238 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 RTP3Q9BQQ7 232 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 CHRDL1Q9BU40 450 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 ELOVL1Q9BW60 279 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 ANKRD60Q9BZ19 345 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC28A3Q9HAS3 691 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 NTN4Q9HB63 628 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 NLKQ9UBE8 527 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 NKX1-2Q9UD57 310 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 PISDQ9UG56 409 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 CDC42EP3Q9UKI2 254 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 TIMM22Q9Y584 194 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 TAF6LQ9Y6J9 622 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 SLCO1B1Q9Y6L6 691 aa5.04□□□□□ -1.6
ECHDC1-222ENST00000531967 IFT140Q96RY7 1462 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 OR6C68A6NDL8 312 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 CD8B2A6NJW9 211 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 KLF11O14901 512 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 MATN3O15232 486 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 INPPL1O15357 1258 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 CALUO43852 315 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 CDC123O75794 336 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 RBBP9O75884 186 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 LCA5LO95447 670 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 POMCP01189 267 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 CALCAP01258 141 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 ESR1P03372 595 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 MX1P20591 662 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF10P21506 573 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 NAMPTP43490 491 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 SPOCK1Q08629 439 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 GK2Q14410 553 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 SOWAHAQ2M3V2 549 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 DCAF6Q58WW2 860 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 TAPT1Q6NXT6 567 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 VRK2Q86Y07 508 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 FAM126BQ8IXS8 530 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 FITM2Q8N6M3 262 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 SCAIQ8N9R8 606 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 PIGKQ92643 395 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 FAM122AQ96E09 287 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 PEX11GQ96HA9 241 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC29A1Q99808 456 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 ROPN1BQ9BZX4 212 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 OR52A5Q9H2C5 316 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 MTIF3Q9H2K0 278 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 CUEDC2Q9H467 287 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF768Q9H5H4 540 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 CDCP1Q9H5V8 836 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 SGK2Q9HBY8 427 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 MRM3Q9HC36 420 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF160Q9HCG1 818 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 EURLQ9NYK6 297 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 AHSPQ9NZD4 102 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 HACD3Q9P035 362 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 TUBGCP4Q9UGJ1 667 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 EBF1Q9UH73 591 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 GGA2Q9UJY4 613 aa5.03□□□□□ -1.6
ECHDC1-222ENST00000531967 NUDT5Q9UKK9 219 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms