RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CAMLGP49069 296 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 SMSP52788 366 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 MLLT10P55197 1068 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 EEF1A1P68104 462 aaKnown RBP4.09□□□□□ -1.75
USP47-211ENST00000531513 CX3CL1P78423 397 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 SLC20A2Q08357 652 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 DSC1Q08554 894 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 KLHL30Q0D2K2 578 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 TRAF3Q13114 568 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 NONOQ15233 471 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP47-211ENST00000531513 C12orf60Q5U649 245 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 EEF1A1P5Q5VTE0 462 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 OR7E24Q6IFN5 339 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 C8orf82Q6P1X6 216 aaPredicted RBP4.09□□□□□ -1.75
USP47-211ENST00000531513 ZCCHC12Q6PEW1 402 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 PRSS57Q6UWY2 283 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 ISLR2Q6UXK2 745 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 GFRALQ6UXV0 394 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 C1orf186Q6ZWK4 172 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 ARMC9Q7Z3E5 817 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 GPALPP1Q8IXQ4 340 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 CRYBG2Q8N1P7 616 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 OR4K1Q8NGD4 311 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 OR52E1Q8NGJ3 308 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 EXOC6Q8TAG9 804 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 SLC26A7Q8TE54 656 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 CDCA5Q96FF9 252 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 OXNAD1Q96HP4 312 aaPredicted RBP4.09□□□□□ -1.75
USP47-211ENST00000531513 GDAP1L1Q96MZ0 367 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 KCNK16Q96T55 309 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 C17orf62Q9BQA9 187 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 NEURL2Q9BR09 285 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 CDK19Q9BWU1 502 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 IDI2Q9BXS1 227 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 TRPC7Q9HCX4 862 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP47-211ENST00000531513 ZNF224Q9NZL3 707 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 PKD2L2Q9NZM6 624 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 SPASTQ9UBP0 616 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 SIX4Q9UIU6 781 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 TSPAN16Q9UKR8 245 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 RUVBL2Q9Y230 463 aaKnown RBP4.09□□□□□ -1.75
USP47-211ENST00000531513 KCNK6Q9Y257 313 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 EXOC6BQ9Y2D4 811 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 CLCA3PQ9Y6N3 262 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 NPHP3Q7Z494 1330 aa4.09□□□□□ -1.75
USP47-211ENST00000531513 TAF1P21675 1872 aa4.09□□□□□ -1.76
USP47-211ENST00000531513 A0A0G2JNG1 304 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 E9PI62 339 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 ATP8B3O60423 1300 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 GLUD1P00367 558 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 HEXBP07686 556 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 LINC00271P0C7V0 271 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 GHRP10912 638 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 ZNF23P17027 643 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 CKMT2P17540 419 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 ARF4P18085 180 aaPredicted RBP4.08□□□□□ -1.76
USP47-211ENST00000531513 RPA1P27694 616 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 MNDAP41218 407 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 GLUD2P49448 558 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 PEX5P50542 639 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 ERVFC1-1P60608 527 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 RPS18P62269 152 aaKnown RBP4.08□□□□□ -1.76
USP47-211ENST00000531513 CACNG1Q06432 222 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 SLC34A1Q06495 639 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 DMPKQ09013 629 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 ZNF415Q09FC8 603 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 RASGEF1BQ0VAM2 473 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 TRAF2Q12933 501 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 KIR2DS5Q14953 304 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 STXBP2Q15833 593 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 UGP2Q16851 508 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 DUOXA1Q1HG43 343 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 PHLDA2Q53GA4 152 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 OTUD3Q5T2D3 398 aaPredicted RBP4.08□□□□□ -1.76
USP47-211ENST00000531513 LYSMD4Q5XG99 296 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 UNC5DQ6UXZ4 953 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 PACS1Q6VY07 963 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 RBM43Q6ZSC3 357 aaKnown RBP4.08□□□□□ -1.76
USP47-211ENST00000531513 ASPGQ86U10 573 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 FJX1Q86VR8 437 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 TMEM219Q86XT9 240 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 ODF3L1Q8IXM7 274 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 BATF2Q8N1L9 274 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 KDM8Q8N371 416 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 CCNYQ8ND76 341 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 FAM216AQ8WUB2 273 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 PYCR2Q96C36 320 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 MRPL38Q96DV4 380 aaKnown RBP4.08□□□□□ -1.76
USP47-211ENST00000531513 TMEM19Q96HH6 336 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 FAM20AQ96MK3 541 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 RASL10BQ96S79 203 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 TEX13AQ9BXU3 409 aaPredicted RBP4.08□□□□□ -1.76
USP47-211ENST00000531513 TSPYL1Q9H0U9 437 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 NAPBQ9H115 298 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 CUEDC2Q9H467 287 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 RAB9BQ9NP90 201 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 KCNS2Q9ULS6 477 aa4.08□□□□□ -1.76
USP47-211ENST00000531513 KLK4Q9Y5K2 254 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms