RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SNRPD1P62314 119 aaKnown RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 PTRH1Q86Y79 214 aaKnown RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 PAPD5Q8NDF8 572 aaKnown RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 OR4F6Q8NGB9 312 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 CENPIQ92674 756 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 GTPBP3Q969Y2 492 aaKnown RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 ACOT13Q9NPJ3 140 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 EFCAB10A6NFE3 127 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 SEMA3DO95025 777 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 MATN4O95460 622 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 CSF2P04141 144 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 DNAJB1P25685 340 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 HTR3AP46098 478 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 RAET1GQ6H3X3 334 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 TUBA3EQ6PEY2 450 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 CYHR1Q6ZMK1 362 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 YAF2Q8IY57 180 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 MAP6Q96JE9 813 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 FYTTD1Q96QD9 318 aaKnown RBP17.39■□□□□ 0.37
LTBP3-210ENST00000528516 PTPN18Q99952 460 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 RNF167Q9H6Y7 350 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 SPIBQ01892 262 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 EMX2Q04743 252 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 KIAA0319Q5VV43 1072 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 KCTD11Q693B1 232 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 FAM180BQ6P0A1 224 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 IL17RDQ8NFM7 739 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 NEDD4LQ96PU5 975 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 MMP28Q9H239 520 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 SPG21Q9NZD8 308 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 ASF1AQ9Y294 204 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 TLR6Q9Y2C9 796 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 LYVE1Q9Y5Y7 322 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 PCNTO95613 3336 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 TRIP11Q15643 1979 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 TBC1D3BA6NDS4 549 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 SNTNA6NMZ2 147 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 CXCR6O00574 342 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 DFNA5O60443 496 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 EEDO75530 441 aaKnown RBP17.39■□□□□ 0.37
LTBP3-210ENST00000528516 TRBC1P01850 177 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 PFKLP17858 780 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 PTNP21246 168 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 MASP1P48740 699 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 BLVRAP53004 296 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 CBX2Q14781 532 aaPredicted RBP17.39■□□□□ 0.37
LTBP3-210ENST00000528516 PDE12Q6L8Q7 609 aaKnown RBP17.39■□□□□ 0.37
LTBP3-210ENST00000528516 PSAPL1Q6NUJ1 521 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 REM2Q8IYK8 340 aaPredicted RBP17.39■□□□□ 0.37
LTBP3-210ENST00000528516 SLC13A3Q8WWT9 602 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 PTERQ96BW5 349 aa17.39■□□□□ 0.37
LTBP3-210ENST00000528516 MKRN2Q9H000 416 aaKnown RBP17.39■□□□□ 0.37
LTBP3-210ENST00000528516 A0A1B0GVM2 712 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 UQCRC1P31930 480 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CSKP41240 450 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 GPLD1P80108 840 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 MXD1Q05195 221 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 RCAN2Q14206 197 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 PAQR9Q6ZVX9 377 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 ISCA2Q86U28 154 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CDH24Q86UP0 819 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CMTM8Q8IZV2 173 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 NLGN4XQ8N0W4 816 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 SIMC1Q8NDZ2 872 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 GPR45Q9Y5Y3 372 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 TTC3P53804 2025 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 SEC16AO15027 2179 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 SMIM30A4D0T7 59 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CCL16O15467 120 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 RPLP0P05388 317 aaKnown RBP17.38■□□□□ 0.37
LTBP3-210ENST00000528516 OR4D1Q15615 310 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 UPP1Q16831 310 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CES5AQ6NT32 575 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 NOXA1Q86UR1 476 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 LRRC20Q8TCA0 184 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 YIPF6Q96EC8 236 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CCDC120Q96HB5 630 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 TUBB1Q9H4B7 451 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 ANKHQ9HCJ1 492 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 FLRT1Q9NZU1 646 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 ZNF639Q9UID6 485 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 SLC22A14Q9Y267 594 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 ZNF451Q9Y4E5 1061 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CFAP20Q9Y6A4 193 aaKnown RBP17.38■□□□□ 0.37
LTBP3-210ENST00000528516 A0A1W2PRU2 124 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 FAM234BA2RU67 622 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 SLC38A8A6NNN8 435 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 ANKRD66B4E2M5 251 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 UPK1AO00322 258 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 SEPT4O43236 478 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CNTN1Q12860 1018 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CHRNA6Q15825 494 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 CAMKK1Q8N5S9 505 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 FLCNQ8NFG4 579 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 OR5AK3PQ8NH89 298 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 UBE2FQ969M7 185 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 SLA2Q9H6Q3 261 aa17.38■□□□□ 0.37
LTBP3-210ENST00000528516 METTL15A6NJ78 407 aa17.37■□□□□ 0.37
LTBP3-210ENST00000528516 IFRD1O00458 451 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms