RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	SPSB2	Q99619	263 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	SGPP1	Q9BX95	441 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	TRIM4	Q9C037	500 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PHACTR1	Q9C0D0	580 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	ATG10	Q9H0Y0	220 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	SLC26A1	Q9H2B4	701 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	RHOJ	Q9H4E5	214 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	WDR54	Q9H977	334 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	MLXIPL	Q9NP71	852 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	CDC23	Q9UJX2	597 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	RUVBL1	Q9Y265	456 aa	Known RBP	11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	TCRBV9S1A1T	A0A576	114 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	P2RX6	O15547	441 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	C1QA	P02745	245 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	ALB	P02768	609 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	PIM1	P11309	404 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	EMP3	P54852	163 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	AP1S2	P56377	157 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	GPX6	P59796	221 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	SNRPN	P63162	240 aa	Known RBP	11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	CKAP4	Q07065	602 aa	Known RBP	11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	PPP1R3A	Q16821	1122 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	MUM1	Q2TAK8	710 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	COLEC12	Q5KU26	742 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	PRMT9	Q6P2P2	845 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	SBSN	Q6UWP8	590 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	CEP97	Q8IW35	865 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	ANKRD49	Q8WVL7	239 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	PTER	Q96BW5	349 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	FBXL8	Q96CD0	374 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	VPS39	Q96JC1	886 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	SLC25A23	Q9BV35	468 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	PCBD2	Q9H0N5	130 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	RAB17	Q9H0T7	212 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	EPN3	Q9H201	632 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	P4HTM	Q9NXG6	502 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	ARL15	Q9NXU5	204 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	NSMCE4A	Q9NXX6	385 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	UTP6	Q9NYH9	597 aa	Known RBP	11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	ANAPC2	Q9UJX6	822 aa		11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.21	□□□□□ -0.61
PSMC3-205	ENST00000528362	SEC16A	O15027	2179 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	ESYT3	A0FGR9	886 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	NPEPPSL1	A6NEC2	478 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	FAM159B	A6NKW6	160 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	VSTM2B	A6NLU5	285 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	MASP2	O00187	686 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CDC7	O00311	574 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	URI1	O94763	535 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	WISP3	O95389	354 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	ENO2	P09104	434 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CDH1	P12830	882 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	NPPB	P16860	134 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	HIST1H2AD	P20671	130 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	MMP11	P24347	488 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CCND1	P24385	295 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	HRH2	P25021	359 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CASR	P41180	1078 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	PGD	P52209	483 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	RRAD	P55042	308 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CSNK1G2	P78368	415 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	SLC7A5	Q01650	507 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CAV1	Q03135	178 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	TLE1	Q04724	770 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	KLRB1	Q12918	225 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	DCAF10	Q5QP82	559 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	SHISA6	Q6ZSJ9	500 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	C3orf62	Q6ZUJ4	267 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CYS1	Q717R9	158 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	VN1R4	Q7Z5H5	301 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CCDC25	Q86WR0	208 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	FDCSP	Q8NFU4	85 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	OR56A3	Q8NH54	315 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	RERG	Q96A58	199 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	ALKBH8	Q96BT7	664 aa	Known RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	PYCR2	Q96C36	320 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	CABS1	Q96KC9	395 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	HIST1H2AH	Q96KK5	128 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	IP6K3	Q96PC2	410 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	OR4K3	Q96R72	315 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	HIST1H2AJ	Q99878	128 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	H2AFJ	Q9BTM1	129 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	NUDT9	Q9BW91	350 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	SOX17	Q9H6I2	414 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	ZNF304	Q9HCX3	659 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	TMEM184C	Q9NVA4	438 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	NXT1	Q9UKK6	140 aa	Known RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	MRPS2	Q9Y399	296 aa	Known RBP	11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	HS3ST3B1	Q9Y662	390 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	PCSK5	Q92824	1860 aa		11.2	□□□□□ -0.62
PSMC3-205	ENST00000528362	IGLV3-12	A0A075B6K2	115 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	KCNE1B	A0A087WTH5	132 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362		A6NL46	340 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	PEX12	O00623	359 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	FOXS1	O43638	330 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	GUCA1C	O95843	209 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	STATH	P02808	62 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	GSTA2	P09210	222 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms