RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 LRRC8BQ6P9F7 803 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 TMEM205Q6UW68 189 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 TMEM139Q8IV31 216 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 CCDC89Q8N998 374 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 SMPDL3AQ92484 453 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 LPGAT1Q92604 370 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 FAM136AQ96C01 138 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 IL22Q9GZX6 179 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 EIF2B3Q9NR50 452 aaKnown RBP22.37■■□□□ 1.17
CPSF1-202ENST00000527827 GALPQ9UBC7 116 aa22.37■■□□□ 1.17
CPSF1-202ENST00000527827 TRGV8A0A0C4DH27 118 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 MYO1CO00159 1063 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 RPA3P35244 121 aaPredicted RBP22.36■■□□□ 1.17
CPSF1-202ENST00000527827 SYT16Q17RD7 645 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 TYSND1Q2T9J0 566 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 ANKRD20A4Q4UJ75 823 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 GARNL3Q5VVW2 1013 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 TMEM207Q6UWW9 146 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 ZC3H7AQ8IWR0 971 aaKnown RBP22.36■■□□□ 1.17
CPSF1-202ENST00000527827 OTUD6BQ8N6M0 293 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 DNAJB8Q8NHS0 232 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 IMMP1LQ96LU5 166 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 DESI2Q9BSY9 194 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 RUBCNLQ9H714 662 aa22.36■■□□□ 1.17
CPSF1-202ENST00000527827 ANKRD17O75179 2603 aaKnown RBP22.36■■□□□ 1.17
CPSF1-202ENST00000527827 A0A0A6YYC8 382 aaPredicted RBP22.35■■□□□ 1.17
CPSF1-202ENST00000527827 GOLGA8KD6RF30 607 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 GOLGA8TH3BQL2 631 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 I3L1I5 382 aaPredicted RBP22.35■■□□□ 1.17
CPSF1-202ENST00000527827 P2RX6O15547 441 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 PSIP1O75475 530 aaKnown RBP22.35■■□□□ 1.17
CPSF1-202ENST00000527827 VAPBO95292 243 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 RASAL1O95294 804 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 CRYABP02511 175 aaKnown RBP22.35■■□□□ 1.17
CPSF1-202ENST00000527827 UQCRHP07919 91 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 CA7P43166 264 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 NPY2RP49146 381 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 SNRPNP63162 240 aaKnown RBP22.35■■□□□ 1.17
CPSF1-202ENST00000527827 ICE2Q659A1 982 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 CES3Q6UWW8 571 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 MRGPRGQ86SM5 289 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 MFSD3Q96ES6 412 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 BAG1Q99933 345 aaPredicted RBP22.35■■□□□ 1.17
CPSF1-202ENST00000527827 KIFC1Q9BW19 673 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 SUCOQ9UBS9 1254 aaKnown RBP22.35■■□□□ 1.17
CPSF1-202ENST00000527827 SEC14L3Q9UDX4 400 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 TAC3Q9UHF0 121 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 MKL2Q9ULH7 1088 aa22.35■■□□□ 1.17
CPSF1-202ENST00000527827 CSMD2Q7Z408 3487 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 OR5H15A6NDH6 313 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 CCL21O00585 134 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 WISP2O76076 250 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 ANXA5P08758 320 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 MAT1AQ00266 395 aaKnown RBP22.34■■□□□ 1.17
CPSF1-202ENST00000527827 PRDX1Q06830 199 aaKnown RBP22.34■■□□□ 1.17
CPSF1-202ENST00000527827 ARHGAP19Q14CB8 494 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 ACSBG2Q5FVE4 666 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 BNC2Q6ZN30 1099 aaPredicted RBP22.34■■□□□ 1.17
CPSF1-202ENST00000527827 ZNF808Q8N4W9 903 aaPredicted RBP22.34■■□□□ 1.17
CPSF1-202ENST00000527827 PKP4Q99569 1192 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 DRC3Q9H069 523 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 BFARQ9NZS9 450 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 PCYOX1Q9UHG3 505 aa22.34■■□□□ 1.17
CPSF1-202ENST00000527827 PRAMEF2O60811 474 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 ICAM2P13598 275 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 EZRP15311 586 aaKnown RBP22.33■■□□□ 1.17
CPSF1-202ENST00000527827 MGAT1P26572 445 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 PNLIPRP1P54315 467 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 ADARP55265 1226 aaKnown RBP22.33■■□□□ 1.17
CPSF1-202ENST00000527827 RELAQ04206 551 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 TSTA3Q13630 321 aaPredicted RBP22.33■■□□□ 1.17
CPSF1-202ENST00000527827 SIX1Q15475 284 aaPredicted RBP22.33■■□□□ 1.17
CPSF1-202ENST00000527827 KLHL38Q2WGJ6 581 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 ABHD17BQ5VST6 288 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 MRNIPQ6NTE8 343 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 SDCCAG8Q86SQ7 713 aaPredicted RBP22.33■■□□□ 1.17
CPSF1-202ENST00000527827 PPFIBP2Q8ND30 876 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 RERGQ96A58 199 aaPredicted RBP22.33■■□□□ 1.17
CPSF1-202ENST00000527827 TUBB6Q9BUF5 446 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 SYBUQ9NX95 663 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 CRYL1Q9Y2S2 319 aa22.33■■□□□ 1.17
CPSF1-202ENST00000527827 POLQO75417 2590 aa22.33■■□□□ 1.16
CPSF1-202ENST00000527827 NCOA6Q14686 2063 aaPredicted RBP22.32■■□□□ 1.16
CPSF1-202ENST00000527827 F8P00451 2351 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 H3BMM5 538 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 ESR1P03372 595 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 PKMP14618 531 aaKnown RBP22.32■■□□□ 1.16
CPSF1-202ENST00000527827 CHRM3P20309 590 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 HTR1EP28566 365 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 AP2B1P63010 937 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 BASP1P80723 227 aaKnown RBP22.32■■□□□ 1.16
CPSF1-202ENST00000527827 PMP22Q01453 160 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 FAM53BQ14153 422 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 KCNJ11Q14654 390 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 ZNF630Q2M218 657 aaPredicted RBP22.32■■□□□ 1.16
CPSF1-202ENST00000527827 RNF187Q5TA31 235 aaPredicted RBP22.32■■□□□ 1.16
CPSF1-202ENST00000527827 NEK10Q6ZWH5 1172 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 SHISA5Q8N114 240 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 TXLNBQ8N3L3 684 aa22.32■■□□□ 1.16
CPSF1-202ENST00000527827 SUN3Q8TAQ9 357 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms