RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 NIPAL2Q9H841 368 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 LRRC40Q9H9A6 602 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 COG4Q9H9E3 785 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 EFCAB1Q9HAE3 211 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 KCNK9Q9NPC2 374 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKEF1Q9NU02 776 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 PLCXD1Q9NUJ7 323 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 OLAHQ9NV23 265 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 VSX1Q9NZR4 365 aaPredicted RBP3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 TMEM216Q9P0N5 145 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 ABCD2Q9UBJ2 740 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 CTSFQ9UBX1 484 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 EPHA6Q9UF33 1036 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 AFF4Q9UHB7 1163 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 SRP68Q9UHB9 627 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 BTNL2Q9UIR0 455 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 RWDD2AQ9UIY3 292 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 CDH22Q9UJ99 828 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 TRHDEQ9UKU6 1024 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 AMFRQ9UKV5 643 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 PCDHGB4Q9UN71 923 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 TFR2Q9UP52 801 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 LIPT1Q9Y234 373 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKRD6Q9Y2G4 727 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 NDUFAF1Q9Y375 327 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 RNF11Q9Y3C5 154 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 MFHAS1Q9Y4C4 1052 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 UTYO14607 1347 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 COL15A1P39059 1388 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 C4AP0C0L4 1744 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 C4BP0C0L5 1744 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 MARF1Q9Y4F3 1742 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 DCCP43146 1447 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 ECM29Q5VYK3 1845 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ATAD5Q96QE3 1844 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KIF13BQ9NQT8 1826 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 TSPOAP1O95153 1857 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 NEXMIFQ5QGS0 1516 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZFYVE16Q7Z3T8 1539 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KIAA0556O60303 1618 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF142P52746 1687 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RIMS1Q86UR5 1692 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 EFCAB7A8K855 629 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 A8MUA0 341 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PDZK1P1A8MUH7 402 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 A8MXE2 369 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KCNJ18B7U540 433 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CLDN4O14493 209 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 AIM2O14862 343 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ANGPT2O15123 496 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CASC3O15234 703 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SGCEO43556 437 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CALUO43852 315 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 DFNA5O60443 496 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 DTNBO60941 627 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 TRIM3O75382 744 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ULK1O75385 1050 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 UPK1BO75841 260 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 IDH1O75874 414 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC22A5O76082 557 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PDE9AO76083 593 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SOX30O94993 753 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CELF2O95319 508 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CTDNEP1O95476 244 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 GH1P01241 217 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 OPN1LWP04000 364 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 LCKP06239 509 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 FCER2P06734 321 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SERPINA6P08185 405 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CD63P08962 238 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 GNAO1P09471 354 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 IL2RBP14784 551 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 DARSP14868 501 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF182P17025 639 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CBLP22681 906 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 WARSP23381 471 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CALML3P27482 149 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 GPX4P36969 197 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 EIF2DP41214 584 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC1A3P43003 542 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KIR3DL2P43630 455 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RPS5P46782 204 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SERPINB10P48595 397 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CCT3P49368 545 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 LIG4P49917 911 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CPT1AP50416 773 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CLCN5P51795 746 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 AKR1D1P51857 326 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 MFAP3P55082 362 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PTENP60484 403 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 MAT1AQ00266 395 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 GLO1Q04760 184 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CHRNDQ07001 517 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC3A1Q07837 685 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 FADDQ13158 208 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PRKG2Q13237 762 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PPIL2Q13356 520 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC39A6Q13433 755 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC12A1Q13621 1099 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SCARB2Q14108 478 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms