RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 MMP17Q9ULZ9 603 aa18.64■□□□□ 0.58
TM9SF1-203ENST00000524835 USP22Q9UPT9 525 aa18.64■□□□□ 0.58
TM9SF1-203ENST00000524835 PLEKHM1Q9Y4G2 1056 aa18.64■□□□□ 0.58
TM9SF1-203ENST00000524835 SNX13Q9Y5W8 968 aa18.64■□□□□ 0.58
TM9SF1-203ENST00000524835 PRUNE2Q8WUY3 3088 aa18.64■□□□□ 0.58
TM9SF1-203ENST00000524835 POM121BA6NF01 834 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 ZNF839A8K0R7 811 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 FOXE1O00358 373 aaPredicted RBP18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 PRMT3O60678 531 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 LRATO95237 230 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 PRPS1L1P21108 318 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 HTR1EP28566 365 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 ACSL1P33121 698 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 S100A3P33764 101 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 HSD17B2P37059 387 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 TPMTP51580 245 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 MTAPQ13126 283 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 MLF2Q15773 248 aaPredicted RBP18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 SFT2D3Q587I9 215 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 PDSS2Q86YH6 399 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 SPPL2CQ8IUH8 684 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 SYT12Q8IV01 421 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 PLCD3Q8N3E9 789 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 HAUS8Q9BT25 410 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 DMRT3Q9NQL9 472 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 LRCH1Q9Y2L9 728 aa18.64■□□□□ 0.57
TM9SF1-203ENST00000524835 TCRBV21S2A2A0A5A6 115 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 CAPNS1P04632 268 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 CDH1P12830 882 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 OR4D2P58180 307 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 C21orf58P58505 322 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 MEF2AQ02078 507 aaPredicted RBP18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 LAPTM5Q13571 262 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 SF1Q15637 639 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 SPIN4Q56A73 249 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 LRIF1Q5T3J3 769 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 DNAJC14Q6Y2X3 702 aaPredicted RBP18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 TRIM69Q86WT6 500 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 GOLM1Q8NBJ4 401 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 CANT1Q8WVQ1 401 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 FAM3CQ92520 227 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 GFM2Q969S9 779 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 C12orf66Q96MD2 445 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 PAIP1Q9H074 479 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 SLC6A13Q9NSD5 602 aa18.63■□□□□ 0.57
TM9SF1-203ENST00000524835 KCNJ13O60928 360 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 SH3BGRLO75368 114 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 B3GALT4O96024 378 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 HOXC4P09017 264 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 MTHFD1P11586 935 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 HOXB9P17482 250 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 GABRG2P18507 467 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 CD72P21854 359 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 CLDN2P57739 230 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 KIAA1024LP59773 190 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 SFSWAPQ12872 951 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 UGT8Q16880 541 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 FAM129CQ86XR2 697 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 ZNF740Q8NDX6 193 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 DENND6BQ8NEG7 585 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 DNAJB8Q8NHS0 232 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 ACAT2Q9BWD1 397 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 KCNH6Q9H252 994 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 IKZF5Q9H5V7 419 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 TAC3Q9UHF0 121 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 TSC22D4Q9Y3Q8 395 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 A0A096LPI6 279 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 A0A1W2PPV9 198 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 ERN1O75460 977 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 NCK1P16333 377 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 PTPN6P29350 595 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 HIST2H2ACQ16777 129 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 DPY19L1Q2PZI1 675 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 PGS1Q32NB8 556 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 GRAMD1BQ3KR37 738 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 GTDC1Q4AE62 458 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 HIST2H2AA3Q6FI13 130 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 GALNT18Q6P9A2 607 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 MSANTD1Q6ZTZ1 278 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 TICAM1Q8IUC6 712 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 MSANTD3Q96H12 275 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 PHF7Q9BWX1 381 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 UBE2ZQ9H832 354 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 RMND5AQ9H871 391 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 CCM2LQ9NUG4 571 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 ARMC1Q9NVT9 282 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 MOSPD1Q9UJG1 213 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 GPSM3Q9Y4H4 160 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 PCDHB3Q9Y5E6 796 aa18.62■□□□□ 0.57
TM9SF1-203ENST00000524835 TCRBV5S2A0A599 114 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 DHRS12A0PJE2 317 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 AKAP10O43572 662 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 MYO1DO94832 1006 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 HRH2P25021 359 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 KIR3DL1P43629 444 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 AQP4P55087 323 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 CYP4F3Q08477 520 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 CLCA4Q14CN2 919 aa18.61■□□□□ 0.57
TM9SF1-203ENST00000524835 RUNDC3AQ59EK9 446 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms