RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 AKAP10O43572 662 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 MTHFD1P11586 935 aaKnown RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 CDH1P12830 882 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 NCK1P16333 377 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 CLDN2P57739 230 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 TFF2Q03403 129 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 ARHGAP19Q14CB8 494 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 FXNQ16595 210 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 CYP2A13Q16696 494 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 PGS1Q32NB8 556 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 EOGTQ5NDL2 527 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 SYT12Q8IV01 421 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 AQP12AQ8IXF9 295 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 TBC1D21Q8IYX1 336 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 C1orf52Q8N6N3 182 aaKnown RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 OR8J3Q8NGG0 315 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 REPS1Q96D71 796 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 METTL2AQ96IZ6 378 aaKnown RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 ACAT2Q9BWD1 397 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 PAIP1Q9H074 479 aaKnown RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 CA5BQ9Y2D0 317 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 GPSM3Q9Y4H4 160 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 SNX13Q9Y5W8 968 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 TRBV5-3A0A0A0MS03 114 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 CACNB4O00305 520 aaPredicted RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 SCAMP1O15126 338 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 PEX1O43933 1283 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 PCSK2P16519 638 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 HTR1EP28566 365 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 TPMTP51580 245 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 SMAD4Q13485 552 aaKnown RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 GTDC1Q4AE62 458 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 PAGE2BQ5JRK9 111 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 DNAJC14Q6Y2X3 702 aaPredicted RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 SCARF2Q96GP6 870 aaPredicted RBP16.24■□□□□ 0.19
SREK1-212ENST00000522912 C12orf66Q96MD2 445 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 TRIM15Q9C019 465 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 VCX3BQ9H321 246 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 MUC13Q9H3R2 512 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 IKZF5Q9H5V7 419 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 FGF22Q9HCT0 170 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 MMP17Q9ULZ9 603 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 MAN2B2Q9Y2E5 1009 aa16.24■□□□□ 0.19
SREK1-212ENST00000522912 TCRBV21S2A2A0A5A6 115 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 FOXE1O00358 373 aaPredicted RBP16.23■□□□□ 0.19
SREK1-212ENST00000522912 GABRG2P18507 467 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 PRPS1L1P21108 318 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 AQP4P55087 323 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 CLCA4Q14CN2 919 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 HIST2H2ACQ16777 129 aaPredicted RBP16.23■□□□□ 0.19
SREK1-212ENST00000522912 UGT8Q16880 541 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 GRAMD1BQ3KR37 738 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 LRIT3Q3SXY7 679 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 RUNDC3AQ59EK9 446 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 HIST2H2AA3Q6FI13 130 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 ANKRD46Q86W74 232 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 TMEM126BQ8IUX1 230 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 GPR156Q8NFN8 814 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 OR7A2PQ8NGA2 310 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 LRTOMTQ8WZ04 291 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 FAM3CQ92520 227 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 FERD3LQ96RJ6 166 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 HAUS8Q9BT25 410 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 INPP5KQ9BT40 448 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 DMRT3Q9NQL9 472 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.23■□□□□ 0.19
SREK1-212ENST00000522912 TAC3Q9UHF0 121 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 LRCH1Q9Y2L9 728 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 NUP214P35658 2090 aaPredicted RBP16.23■□□□□ 0.19
SREK1-212ENST00000522912 A0A1W2PPV9 198 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 CAPNS1P04632 268 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 GLULP15104 373 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 HOXB9P17482 250 aaPredicted RBP16.23■□□□□ 0.19
SREK1-212ENST00000522912 HRH2P25021 359 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 PTPN6P29350 595 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 MTAPQ13126 283 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 LAPTM5Q13571 262 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 FBXO43Q4G163 708 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 LRIF1Q5T3J3 769 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 OR4F3Q6IEY1 312 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 FAM129CQ86XR2 697 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 ZNF583Q96ND8 569 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 KCNH6Q9H252 994 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 PRM3Q9NNZ6 103 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 CCM2LQ9NUG4 571 aaPredicted RBP16.23■□□□□ 0.19
SREK1-212ENST00000522912 SPATA7Q9P0W8 599 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 PCDHB14Q9Y5E9 798 aa16.23■□□□□ 0.19
SREK1-212ENST00000522912 A0A096LPI6 279 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 TCRBV5S2A0A599 114 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 H0Y8X5 98 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 PRMT3O60678 531 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 MYO1DO94832 1006 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 TGFB1P01137 390 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 PSMB5P28074 263 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 HSD17B2P37059 387 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 CYP4F3Q08477 520 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 SPIN4Q56A73 249 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 TPRG1LQ5T0D9 272 aa16.22■□□□□ 0.19
SREK1-212ENST00000522912 IRAK1BP1Q5VVH5 260 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms