RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 KDELR3O43731 214 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 HCN1O60741 890 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 MNDAP41218 407 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 SNX33Q8WV41 574 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 PGAP3Q96FM1 320 aaPredicted RBP13.45□□□□□ -0.26
SYNPO-205ENST00000522122 MYRFLQ96LU7 910 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 CTPS2Q9NRF8 586 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 NLE1Q9NVX2 485 aaPredicted RBP13.45□□□□□ -0.26
SYNPO-205ENST00000522122 POFUT2Q9Y2G5 429 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 TCRBV3S1A0A5B6 114 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 WNT9AO14904 365 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 VIPP01282 170 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 SLC35G6P0C7Q6 338 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 IL7RP16871 459 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 PRKACGP22612 351 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 HTR1EP28566 365 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 PGGT1BP53609 377 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 PRKCZQ05513 592 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 MEP1AQ16819 746 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 SPIN4Q56A73 249 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 RNASE12Q5GAN4 147 aaKnown RBP13.45□□□□□ -0.26
SYNPO-205ENST00000522122 COLEC12Q5KU26 742 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 MBOAT1Q6ZNC8 495 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 AMZ2Q86W34 360 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 RHEBL1Q8TAI7 183 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 UFD1Q92890 307 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 PEX13Q92968 403 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 IMP4Q96G21 291 aaKnown RBP13.45□□□□□ -0.26
SYNPO-205ENST00000522122 IL4I1Q96RQ9 567 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 IL12RB2Q99665 862 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
SYNPO-205ENST00000522122 SLC45A1Q9Y2W3 748 aa13.45□□□□□ -0.26
SYNPO-205ENST00000522122 M0QX08 132 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 SNAI1O95863 264 aaPredicted RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CDK4P11802 303 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 PIK3CBP42338 1070 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 HLCSP50747 726 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 RORCP51449 518 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CRB2Q5IJ48 1285 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 GDPD4Q6W3E5 623 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 TPRG1Q6ZUI0 275 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 PEX5LQ8IYB4 626 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 COL21A1Q96P44 957 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 TPT1P8Q9HAU6 139 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 PHF11Q9UIL8 331 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 HMX2A2RU54 273 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 ZBTB42B2RXF5 422 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 VILLO15195 856 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 MAFKO60675 156 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 SRPRAP08240 638 aaKnown RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 INHBCP55103 352 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 ABATP80404 500 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 E2F2Q14209 437 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 GRB14Q14449 540 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 RANBP3LQ86VV4 465 aaPredicted RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 OR14C36Q8NHC7 312 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 SH3RF2Q8TEC5 729 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 GEMIN6Q8WXD5 167 aaKnown RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CRELD1Q96HD1 420 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 LRCH3Q96II8 777 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF641Q96N77 438 aaPredicted RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 MED28Q9H204 178 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 MOV10Q9HCE1 1003 aaKnown RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 MBD2Q9UBB5 411 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 RNF11Q9Y3C5 154 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 RLN1P04808 185 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 MAGEA12P43365 314 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 BCAP31P51572 246 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 C1QTNF8P60827 252 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 STXBP1P61764 594 aaKnown RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 LRP8Q14114 963 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 TMEM44Q2T9K0 475 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 TMC8Q8IU68 726 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CNTN4Q8IWV2 1026 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CADM2Q8N3J6 435 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CPA6Q8N4T0 437 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF563Q8TA94 476 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CD99L2Q8TCZ2 262 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 LCN9Q8WX39 176 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CEP295NLQ96MC4 621 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 NEK6Q9HC98 313 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 FAM120CQ9NX05 1096 aaKnown RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 WWP2O00308 870 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 GPR32O75388 356 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 RYKP34925 604 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 RFC2P35250 354 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 AGTR2P50052 363 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 DSTNP60981 165 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 GRB7Q14451 532 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 RPTNQ6XPR3 784 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 OTOP2Q7RTS6 562 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 GPRIN1Q7Z2K8 1008 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 CHERPQ8IWX8 916 aaKnown RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 SAMD14Q8IZD0 417 aaPredicted RBP13.44□□□□□ -0.26
SYNPO-205ENST00000522122 UMODL1-AS1Q8N2C9 162 aa13.44□□□□□ -0.26
SYNPO-205ENST00000522122 OR10Q1Q8NGQ4 319 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms