RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 APOBEC4Q8WW27 367 aaKnown RBP4.5□□□□□ -1.69
SKP1-208ENST00000521216 ZNF486Q96H40 463 aaPredicted RBP4.5□□□□□ -1.69
SKP1-208ENST00000521216 EDEM3Q9BZQ6 932 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 RNF121Q9H920 327 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 MAN2C1Q9NTJ4 1040 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 RASAL2Q9UJF2 1139 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 PPP1R3CQ9UQK1 317 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 O00370 1275 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 KHDRBS3O75525 346 aaKnown RBP4.49□□□□□ -1.69
SKP1-208ENST00000521216 ATP1B1P05026 303 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 VIMP08670 466 aaKnown RBP4.49□□□□□ -1.69
SKP1-208ENST00000521216 SPP1P10451 314 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 SCG2P13521 617 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 IFNAR1P17181 557 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 LBPP18428 481 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 SFTPDP35247 375 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 LEPRP48357 1165 aaKnown RBP4.49□□□□□ -1.69
SKP1-208ENST00000521216 CACNG1Q06432 222 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 SHEQ5VZ18 495 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 LYSMD4Q5XG99 296 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 FAM91A1Q658Y4 838 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 PIGWQ7Z7B1 504 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 DZIP1Q86YF9 867 aaKnown RBP4.49□□□□□ -1.69
SKP1-208ENST00000521216 CROCCP3Q8IVE0 287 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 OR6S1Q8NH40 331 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 ST6GALNAC6Q969X2 333 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 KLHL5Q96PQ7 755 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 LPAR4Q99677 370 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 ASCL2Q99929 193 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 NYXQ9GZU5 481 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 SDCBP2Q9H190 292 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 ACTL8Q9H568 366 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 EXOGQ9Y2C4 368 aaKnown RBP4.49□□□□□ -1.69
SKP1-208ENST00000521216 POMT1Q9Y6A1 747 aa4.49□□□□□ -1.69
SKP1-208ENST00000521216 IGSF1Q8N6C5 1336 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 TRBV5-5A0A0J9YX44 114 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 HTR3EA5X5Y0 456 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 PRAF2O60831 178 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 NXPH2O95156 264 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 PGLSO95336 258 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 RPN1P04843 607 aaKnown RBP4.48□□□□□ -1.69
SKP1-208ENST00000521216 FAM58BPP0C7Q3 252 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 GP1BBP13224 206 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 RPL35AP18077 110 aaKnown RBP4.48□□□□□ -1.69
SKP1-208ENST00000521216 MFAP3P55082 362 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 TNK1Q13470 666 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 TRIM29Q14134 588 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 HLA-BQ31612 363 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 CYB5D1Q6P9G0 228 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 IL17RELQ6ZVW7 336 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 GALNTL5Q7Z4T8 443 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 SPATA19Q7Z5L4 167 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 APCDD1Q8J025 514 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 LRTM2Q8N967 370 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 OR4C15Q8NGM1 316 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 PIK3R3Q92569 461 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 RAD54LQ92698 747 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 BTBD9Q96Q07 612 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 INTS14Q96SY0 518 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 NDNQ99608 321 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 INPP5KQ9BT40 448 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 RAB9BQ9NP90 201 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 SPHK2Q9NRA0 654 aa4.48□□□□□ -1.69
SKP1-208ENST00000521216 TRBV4-1A0A0J9YWV2 114 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 WDR46O15213 610 aaKnown RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 DUS4LO95620 317 aaKnown RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 BAG3O95817 575 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 RNF224P0DH78 156 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 F3P13726 295 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 SP100P23497 879 aaPredicted RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 HOXC13P31276 330 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 MMP12P39900 470 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 OPRL1P41146 370 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 XGP55808 180 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 SULT2A1Q06520 285 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 SGCGQ13326 291 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 TMEM132DQ14C87 1099 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 PTPN14Q15678 1187 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 TAZQ16635 292 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 FAM174BQ3ZCQ3 159 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 BSPRYQ5W0U4 402 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 TTC27Q6P3X3 843 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 DCLRE1AQ6PJP8 1040 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 FIP1L1Q6UN15 594 aaKnown RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 C9orf43Q8TAL5 461 aaPredicted RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 MAPK15Q8TD08 544 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 SLC26A7Q8TE54 656 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 SEPT1Q8WYJ6 367 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 BSCL2Q96G97 398 aaPredicted RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 CDCA3Q99618 268 aaPredicted RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 CITED2Q99967 270 aaPredicted RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 THUMPD3Q9BV44 507 aaKnown RBP4.47□□□□□ -1.69
SKP1-208ENST00000521216 TMEM181Q9P2C4 612 aa4.47□□□□□ -1.69
SKP1-208ENST00000521216 A0A087WUV0 522 aaPredicted RBP4.46□□□□□ -1.7
SKP1-208ENST00000521216 A0A087WV48 116 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 A0A1W2PR80 420 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 C17orf105B2RV13 164 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 TEX28O15482 410 aa4.46□□□□□ -1.7
SKP1-208ENST00000521216 PPIP5K2O43314 1243 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms