RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CCL4P13236 92 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 ST6GAL1P15907 406 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 CD22P20273 847 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 GABREP78334 506 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 CLCQ05315 142 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 BST1Q10588 318 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 EIF3IQ13347 325 aaKnown RBP14.72□□□□□ -0.05
LSM1-203ENST00000520755 RCN2Q14257 317 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 SLC5A12Q1EHB4 618 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 KIAA1614Q5VZ46 1190 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 SNX31Q8N9S9 440 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 OR2L3Q8NG85 312 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 KLHL6Q8WZ60 621 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 TRAPPC9Q96Q05 1148 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 SORT1Q99523 831 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 MIPEPQ99797 713 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 SPNS1Q9H2V7 528 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 SEMA4BQ9NPR2 832 aaPredicted RBP14.72□□□□□ -0.05
LSM1-203ENST00000520755 OCIAD1Q9NX40 245 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 PISDQ9UG56 409 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 KLHL20Q9Y2M5 609 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 MSRB2Q9Y3D2 182 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 PCDHB11Q9Y5F2 797 aa14.72□□□□□ -0.05
LSM1-203ENST00000520755 TRABD2BA6NFA1 517 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 PLD2O14939 933 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 PRAMEF10O60809 474 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 SNNO75324 88 aaPredicted RBP14.71□□□□□ -0.05
LSM1-203ENST00000520755 CDH1P12830 882 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 EPB42P16452 691 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 ITIH1P19827 911 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 MAGP20916 626 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 MAPK10P53779 464 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 SH3BP2P78314 561 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 LCP2Q13094 533 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 CAMK2BQ13554 666 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 E2F2Q14209 437 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 KCNAB1Q14722 419 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 CATSPEREQ5SY80 951 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 TMPRSS11BQ86T26 416 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 CARFQ8N187 725 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 RAB3IL1Q8TBN0 382 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 TRPC4APQ8TEL6 797 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 AGAP11Q8TF27 550 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 DYDC1Q8WWB3 177 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 ZNF75CPQ92670 426 aaPredicted RBP14.71□□□□□ -0.05
LSM1-203ENST00000520755 SLC41A2Q96JW4 573 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 DRC3Q9H069 523 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 NOL11Q9H8H0 719 aaKnown RBP14.71□□□□□ -0.05
LSM1-203ENST00000520755 IPPKQ9H8X2 491 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 POLR1BQ9H9Y6 1135 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 GPRC5BQ9NZH0 403 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 SEMA5BQ9P283 1151 aa14.71□□□□□ -0.05
LSM1-203ENST00000520755 KCNE1BA0A087WTH5 132 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 TMEM114B3SHH9 223 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 KLF11O14901 512 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 MAP3K7O43318 606 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 H2AFYO75367 372 aaKnown RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 EBLN1P0CF75 366 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 NELFEP18615 380 aaKnown RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 VARSP26640 1264 aaKnown RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 CMPK1P30085 196 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 MDH1P40925 334 aaKnown RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 ETV5P41161 510 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 MLLT3P42568 568 aaPredicted RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 PIK3CGP48736 1102 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 HSD11B2P80365 405 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 SHC2P98077 582 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 OCRLQ01968 901 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 PRDX1Q06830 199 aaKnown RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 FOXM1Q08050 763 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 PCDH1Q08174 1060 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 ASPHQ12797 758 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 ARL13AQ5H913 290 aaPredicted RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 TTC19Q6DKK2 380 aaPredicted RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 ZNF425Q6IV72 752 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 LETMD1Q6P1Q0 360 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 SLCO4C1Q6ZQN7 724 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 RGS9BPQ6ZS82 235 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 SYVN1Q86TM6 617 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 C17orf64Q86WR6 236 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 KMT5CQ86Y97 462 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 C19orf47Q8N9M1 422 aaKnown RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 SLC5A11Q8WWX8 675 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 WDR34Q96EX3 536 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 CNDP1Q96KN2 507 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 MAGEB18Q96M61 343 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 CDK15Q96Q40 435 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 ZNF382Q96SR6 550 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 HAUS8Q9BT25 410 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 SHCBP1LQ9BZQ2 653 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 NRSN2Q9GZP1 204 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 PCBD2Q9H0N5 130 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 MANSC1Q9H8J5 431 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 SYNPO2LQ9H987 977 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 PDE7BQ9NP56 450 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 MRPS30Q9NP92 439 aaKnown RBP14.7□□□□□ -0.06
LSM1-203ENST00000520755 DYRK1BQ9Y463 629 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 AK5Q9Y6K8 562 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 CACNA1AO00555 2505 aa14.7□□□□□ -0.06
LSM1-203ENST00000520755 POLR3GO15318 223 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms