RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 EOGTQ5NDL2 527 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 C1orf52Q8N6N3 182 aaKnown RBP17.81■□□□□ 0.44
FAM49B-214ENST00000519540 GFM2Q969S9 779 aaKnown RBP17.81■□□□□ 0.44
FAM49B-214ENST00000519540 INSM2Q96T92 566 aaPredicted RBP17.81■□□□□ 0.44
FAM49B-214ENST00000519540 KCNH6Q9H252 994 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 SPNS1Q9H2V7 528 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 OSGEPL1Q9H4B0 414 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 PIF1Q9H611 641 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 CCM2LQ9NUG4 571 aaPredicted RBP17.81■□□□□ 0.44
FAM49B-214ENST00000519540 ARMC1Q9NVT9 282 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 SUFUQ9UMX1 484 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 KCNK6Q9Y257 313 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 PLEKHM1Q9Y4G2 1056 aa17.81■□□□□ 0.44
FAM49B-214ENST00000519540 TRBV5-3A0A0A0MS03 114 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 PRR19A6NJB7 356 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 KCNJ13O60928 360 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 SH3BGRLO75368 114 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 ASGR2P07307 311 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 MTHFD1P11586 935 aaKnown RBP17.8■□□□□ 0.44
FAM49B-214ENST00000519540 GLULP15104 373 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 OR4D2P58180 307 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 MEF2AQ02078 507 aaPredicted RBP17.8■□□□□ 0.44
FAM49B-214ENST00000519540 SFSWAPQ12872 951 aaKnown RBP17.8■□□□□ 0.44
FAM49B-214ENST00000519540 GRAMD1BQ3KR37 738 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 FBXO43Q4G163 708 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 RUNDC3AQ59EK9 446 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 DUS1LQ6P1R4 473 aaKnown RBP17.8■□□□□ 0.44
FAM49B-214ENST00000519540 KIAA1324Q6UXG2 1013 aaKnown RBP17.8■□□□□ 0.44
FAM49B-214ENST00000519540 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 SCARF2Q96GP6 870 aaPredicted RBP17.8■□□□□ 0.44
FAM49B-214ENST00000519540 ITCHQ96J02 903 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 ZNF583Q96ND8 569 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 EFHD1Q9BUP0 239 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 PAIP1Q9H074 479 aaKnown RBP17.8■□□□□ 0.44
FAM49B-214ENST00000519540 RMND5AQ9H871 391 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 MOSPD1Q9UJG1 213 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 PCDHB3Q9Y5E6 796 aa17.8■□□□□ 0.44
FAM49B-214ENST00000519540 POM121BA6NF01 834 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 MBTPS2O43462 519 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 AKAP10O43572 662 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 NARSO43776 548 aaKnown RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 ERN1O75460 977 aaKnown RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 CDH1P12830 882 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 NCK1P16333 377 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 ACSL1P33121 698 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 MTAPQ13126 283 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 CCINQ13939 588 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 AASDHQ4L235 1098 aaPredicted RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 SPIN4Q56A73 249 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 LRIF1Q5T3J3 769 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 GPR180Q86V85 440 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 ADCY4Q8NFM4 1077 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 LRTOMTQ8WZ04 291 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 C12orf66Q96MD2 445 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 FERD3LQ96RJ6 166 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 PRM3Q9NNZ6 103 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 SLC6A13Q9NSD5 602 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 SPATA7Q9P0W8 599 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 GPSM3Q9Y4H4 160 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 DTNAQ9Y4J8 743 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 CROCCQ5TZA2 2017 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 SPTBN5Q9NRC6 3674 aaKnown RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 A0A096LPI6 279 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 SOX11P35716 441 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 TPMTP51580 245 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 AQP4P55087 323 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 C21orf58P58505 322 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 CYP4F3Q08477 520 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 MLF2Q15773 248 aaPredicted RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 UGT8Q16880 541 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 DPY19L1Q2PZI1 675 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 DNAJC14Q6Y2X3 702 aaPredicted RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 MSANTD1Q6ZTZ1 278 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 PROSER1Q86XN7 944 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 FAM129CQ86XR2 697 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 TICAM1Q8IUC6 712 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 ZNF740Q8NDX6 193 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 OR7A2PQ8NGA2 310 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 FAM3CQ92520 227 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 SH3GL1Q99961 368 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 THUMPD3Q9BV44 507 aaKnown RBP17.79■□□□□ 0.44
FAM49B-214ENST00000519540 ACAT2Q9BWD1 397 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 IKZF5Q9H5V7 419 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 DMRT3Q9NQL9 472 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 MMP17Q9ULZ9 603 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 TSC22D4Q9Y3Q8 395 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 PCDHB14Q9Y5E9 798 aa17.79■□□□□ 0.44
FAM49B-214ENST00000519540 TCRBV5S2A0A599 114 aa17.78■□□□□ 0.44
FAM49B-214ENST00000519540 DHRS12A0PJE2 317 aa17.78■□□□□ 0.44
FAM49B-214ENST00000519540 HOXC4P09017 264 aaPredicted RBP17.78■□□□□ 0.44
FAM49B-214ENST00000519540 ANXA4P09525 319 aaPredicted RBP17.78■□□□□ 0.44
FAM49B-214ENST00000519540 CD72P21854 359 aa17.78■□□□□ 0.44
FAM49B-214ENST00000519540 HRH2P25021 359 aa17.78■□□□□ 0.44
FAM49B-214ENST00000519540 KIR3DL1P43629 444 aa17.78■□□□□ 0.44
FAM49B-214ENST00000519540 CLDN2P57739 230 aa17.78■□□□□ 0.44
FAM49B-214ENST00000519540 SRSF11Q05519 484 aaKnown RBP17.78■□□□□ 0.44
FAM49B-214ENST00000519540 SMAD4Q13485 552 aaKnown RBP17.78■□□□□ 0.44
FAM49B-214ENST00000519540 LRIT3Q3SXY7 679 aa17.78■□□□□ 0.44
FAM49B-214ENST00000519540 GTDC1Q4AE62 458 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms