RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 CA4P22748 312 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 LOXP28300 417 aaPredicted RBP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 RFC1P35251 1148 aaPredicted RBP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CCR8P51685 355 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 DSCR9P59020 149 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TPI1P60174 286 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 LSM11P83369 360 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SCGB2A2Q13296 93 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CUL4BQ13620 913 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PPP2R5EQ16537 467 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 C15orf59Q2T9L4 293 aaPredicted RBP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MUM1Q2TAK8 710 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 FNBP1LQ5T0N5 605 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CCDC183Q5T5S1 534 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MFSD4BQ5TF39 518 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TMEM220Q6QAJ8 160 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MDGA2Q7Z553 956 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 BRAPQ7Z569 592 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SLFN11Q7Z7L1 901 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 NOP9Q86U38 636 aaKnown RBP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 ARHGEF19Q8IW93 802 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PGBD5Q8N414 524 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 GPR26Q8NDV2 337 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 LPCAT1Q8NF37 534 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 OR10H5Q8NGA6 315 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 BRSK1Q8TDC3 778 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 NTAN1Q96AB6 310 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MSI2Q96DH6 328 aaKnown RBP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TRIM44Q96DX7 344 aaPredicted RBP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 KREMEN1Q96MU8 473 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 ZNF599Q96NL3 588 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 LYSMD1Q96S90 227 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 HGH1Q9BTY7 390 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TGIF2Q9GZN2 237 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MANSC1Q9H8J5 431 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SPRR3Q9UBC9 169 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CDC14AQ9UNH5 594 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CNTN6Q9UQ52 1028 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 KLHL20Q9Y2M5 609 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PCDHA13Q9Y5I0 950 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CLIC4Q9Y696 253 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 DUSP10Q9Y6W6 482 aa5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SNRNP200O75643 2136 aaKnown RBP5.24□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TENM2Q9NT68 2774 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PINLYPA6NC86 204 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MGAT4DA6NG13 374 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 ELOA3DA6NLF2 546 aaPredicted RBP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 AHRRA9YTQ3 701 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 ISM1B1AKI9 464 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 IFRD1O00458 451 aaPredicted RBP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PPP1R12AO14974 1030 aaPredicted RBP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 HCN1O60741 890 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TGFAP01135 160 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CHRM5P08912 532 aaPredicted RBP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CELA3AP09093 270 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SDC4P31431 198 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 FMO4P31512 558 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SHMT2P34897 504 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 USP8P40818 1118 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 GRIA3P42263 894 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 DIO3P55073 304 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 BPIFB4P59827 614 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 UBE2HP62256 183 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 COL10A1Q03692 680 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 LGALS3BPQ08380 585 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CETN1Q12798 172 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PRKG2Q13237 762 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SLC10A1Q14973 349 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SF3B4Q15427 424 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 NRF1Q16656 503 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CA9Q16790 459 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 ELOA3BQ3SY89 546 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MINDY4Q4G0A6 757 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 BEX5Q5H9J7 111 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 WASHC2DQ5SRD0 308 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PAPD4Q6PIY7 484 aaKnown RBP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 WDR59Q6PJI9 974 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 UNC5AQ6ZN44 842 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 GK5Q6ZS86 529 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SH2D5Q6ZV89 423 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 ZC3H7AQ8IWR0 971 aaKnown RBP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TMEM156Q8N614 296 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 TMEM251Q8N6I4 163 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 EMC1Q8N766 993 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 RASGEF1AQ8N9B8 481 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 PSD4Q8NDX1 1056 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 ELOA3Q8NG57 546 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 OR2M7Q8NG81 312 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 NSMCE1Q8WV22 266 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 AKAP1Q92667 903 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 MARK4Q96L34 752 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 SPATA13Q96N96 652 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 WWC2-AS2Q96NR7 200 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 NAP1L5Q96NT1 182 aaPredicted RBP5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 BTBD9Q96Q07 612 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 VPS35Q96QK1 796 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 JMJD8Q96S16 334 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CYTH2Q99418 400 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 LPAR4Q99677 370 aa5.23□□□□□ -1.57
SCARNA21.2-201ENST00000516600 CCM2Q9BSQ5 444 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms