RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CCT3P49368 545 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 HK3P52790 923 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TAS2R60P59551 318 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 RAB4BP61018 213 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 HERVK_113P63132 956 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 CDKL1Q00532 357 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 RPL6Q02878 288 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TEAD4Q15561 434 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TOR1AIP1Q5JTV8 583 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 OVOS1Q6IE37 1185 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 NAPEPLDQ6IQ20 393 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 LETMD1Q6P1Q0 360 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 RABEPKQ7Z6M1 372 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 LRRTM4Q86VH4 590 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 FJX1Q86VR8 437 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 LACC1Q8IV20 430 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF683Q8IZ20 524 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 IL17RCQ8NAC3 791 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 KLHDC9Q8NEP7 349 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TMIEQ8NEW7 156 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 CHAC2Q8WUX2 184 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ADAMTS14Q8WXS8 1223 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ADAM2Q99965 735 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TBL1YQ9BQ87 522 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC25A23Q9BV35 468 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 BTBD1Q9H0C5 482 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ABCB10Q9NRK6 738 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 MIOXQ9UGB7 285 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 PCDHGA7Q9Y5G6 932 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TEX13CA0A0J9YWL9 993 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 MFSD2BA6NFX1 497 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 NUDT19A8MXV4 375 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 SEPT4O43236 478 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 AHSGP02765 367 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 DNTTP04053 509 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 IL7P13232 177 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 HNRNPLP14866 589 aaKnown RBP eCLIP7.27□□□□□ -1.255e-8■■■□□ 14.7
PDLIM5-219ENST00000514743 PTBP1P26599 531 aaKnown RBP eCLIP7.27□□□□□ -1.259e-7■■■■□ 21.6
PDLIM5-219ENST00000514743 ACTR1BP42025 376 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 CDKN1CP49918 316 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ATXN3P54252 364 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 MADCAM1Q13477 382 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 KCNAB1Q14722 419 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 IRF4Q15306 451 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 PDZK1Q5T2W1 519 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 LIPNQ5VXI9 398 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 DEGS2Q6QHC5 323 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 EPGNQ6UW88 154 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 MSANTD1Q6ZTZ1 278 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 KRT73Q86Y46 540 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 CHERPQ8IWX8 916 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 CENPLQ8N0S6 344 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ZIC5Q96T25 663 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 PFDN5Q99471 154 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TBCDQ9BTW9 1192 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 EDEM2Q9BV94 578 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 PRKD2Q9BZL6 878 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 SIK2Q9H0K1 926 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 TTYH1Q9H313 450 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ABCC13Q9NSE7 274 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 OXSMQ9NWU1 459 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ABCD2Q9UBJ2 740 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 NUDT5Q9UKK9 219 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 BAIAP2Q9UQB8 552 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 DHRS7Q9Y394 339 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 HS3ST4Q9Y661 456 aa7.27□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SERTM1A2A2V5 107 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 POM121BA6NF01 834 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MATN3O15232 486 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CAPN5O15484 640 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 PRKRAO75569 313 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 IPO13O94829 963 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 PRF1P14222 555 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 EEF1B2P24534 225 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RYKP34925 604 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MSX2P35548 267 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 NUMBP49757 651 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 GBX2P52951 348 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 TXNL4AP83876 142 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF177Q13360 481 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 IHHQ14623 411 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 KCNA10Q16322 511 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 DDR2Q16832 855 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 EIF2S3LQ2VIR3 472 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC9B1Q4ZJI4 515 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RGMBQ6NW40 437 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MEX3BQ6ZN04 569 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 GDPD3Q7L5L3 318 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RAB11FIP2Q7L804 512 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 RTN4RL1Q86UN2 441 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 COMMD7Q86VX2 200 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 CCDC117Q8IWD4 279 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 DENND6AQ8IWF6 608 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 PQLC1Q8N2U9 271 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ATPAF2Q8N5M1 289 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 LINC01599Q8WXQ3 324 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 FCRL2Q96LA5 508 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 MRGPRX2Q96LB1 330 aa7.26□□□□□ -1.25
PDLIM5-219ENST00000514743 ADAD1Q96M93 576 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms