RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 SNF8Q96H20 258 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 NDNQ99608 321 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 SGPP1Q9BX95 441 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 CCDC68Q9H2F9 335 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 TXLNGQ9NUQ3 528 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 TAS2R13Q9NYV9 303 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 IFT80Q9P2H3 777 aaPredicted RBP12.86□□□□□ -0.35
CLDND1-224ENST00000511667 SLC17A6Q9P2U8 582 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 ZC3H7BQ9UGR2 993 aaKnown RBP12.86□□□□□ -0.35
CLDND1-224ENST00000511667 ADAMTS6Q9UKP5 1117 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 PDE10AQ9Y233 779 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 MTORP42345 2549 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 CELSR1Q9NYQ6 3014 aa12.86□□□□□ -0.35
CLDND1-224ENST00000511667 CNTRLQ7Z7A1 2325 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 HYKKA2RU49 373 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 WIPF3A6NGB9 483 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 H0YGG7 62 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 SORBS2O94875 1100 aaKnown RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 WISP3O95389 354 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 CLDN1O95832 211 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 C8GP07360 202 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 EZRP15311 586 aaKnown RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 MMP11P24347 488 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 CARSP49589 748 aaKnown RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 RRADP55042 308 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 FOXL2P58012 376 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 VSX2P58304 361 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 ARF3P61204 181 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 FASTKD3Q14CZ7 662 aaKnown RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 DCAF10Q5QP82 559 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 MLIPQ5VWP3 458 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 UGT3A1Q6NUS8 523 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 PRMT9Q6P2P2 845 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 IGFL3Q6UXB1 125 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 UBE2R2Q712K3 238 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 CYS1Q717R9 158 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 HPS6Q86YV9 775 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 DTWD1Q8N5C7 304 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 SPATA4Q8NEY3 305 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 FDCSPQ8NFU4 85 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 MVB12AQ96EY5 273 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 CCDC138Q96M89 665 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 SLC25A23Q9BV35 468 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 SARGQ9BW04 601 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 NUDT9Q9BW91 350 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 ACAT2Q9BWD1 397 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 SLC7A5P2Q9GIP4 190 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 MRPS30Q9NP92 439 aaKnown RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 GRHL1Q9NZI5 618 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 STOX2Q9P2F5 926 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 TAC3Q9UHF0 121 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 TRMT6Q9UJA5 497 aaKnown RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 PTRH2Q9Y3E5 179 aaKnown RBP12.85□□□□□ -0.35
CLDND1-224ENST00000511667 SHANK1Q9Y566 2161 aa12.85□□□□□ -0.35
CLDND1-224ENST00000511667 A0A0J9YVX5 310 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 SOCS6O14544 535 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 FOXS1O43638 330 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 CCNDBP1O95273 360 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 IGHEP01854 428 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 PIM1P11309 404 aaPredicted RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 HRH2P25021 359 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 RPA3P35244 121 aaPredicted RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 FOLR3P41439 243 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 PAFAH1B1P43034 410 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 ARL4CP56559 192 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 ETF1P62495 437 aaKnown RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 SNRPNP63162 240 aaKnown RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 PHKG1Q16816 387 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 HECTD2Q5U5R9 776 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 GARNL3Q5VVW2 1013 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 DUPD1Q68J44 220 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 TMEM207Q6UWW9 146 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 TTC29Q8NA56 475 aaPredicted RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 PPFIBP2Q8ND30 876 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 GABPB2Q8TAK5 448 aaPredicted RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 ANKRD7Q92527 254 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 ANP32BQ92688 251 aaKnown RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 OLFM1Q99784 485 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 PARVBQ9HBI1 364 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 ACSS2Q9NR19 701 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 P4HTMQ9NXG6 502 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 WHRNQ9P202 907 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 C5AR2Q9P296 337 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 CTSFQ9UBX1 484 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 NDOR1Q9UHB4 597 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 TSR3Q9UJK0 312 aaKnown RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 VWA7Q9Y334 891 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 PSAT1Q9Y617 370 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLDND1-224ENST00000511667 PDZD2O15018 2839 aa12.84□□□□□ -0.35
CLDND1-224ENST00000511667 APCP25054 2843 aa12.83□□□□□ -0.36
CLDND1-224ENST00000511667 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
CLDND1-224ENST00000511667 TTLL8A6PVC2 850 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms