RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 NOVA2Q9UNW9 492 aaKnown RBP10.4□□□□□ -0.74
RNF4-212ENST00000509258 MRPS2Q9Y399 296 aaKnown RBP10.4□□□□□ -0.74
RNF4-212ENST00000509258 HS3ST3B1Q9Y662 390 aa10.4□□□□□ -0.74
RNF4-212ENST00000509258 MAD1L1Q9Y6D9 718 aa10.4□□□□□ -0.74
RNF4-212ENST00000509258 LRBAP50851 2863 aa10.4□□□□□ -0.74
RNF4-212ENST00000509258 CRYBG3Q68DQ2 2970 aa10.4□□□□□ -0.75
RNF4-212ENST00000509258 CSMD1Q96PZ7 3565 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 HYKKA2RU49 373 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 VSTM2BA6NLU5 285 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 TARM1B6A8C7 271 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 E5RI56 91 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 E7ENX8 843 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 H3BMM5 538 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 GFYI3L273 518 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 DNALI1O14645 258 aaPredicted RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 SRPX2O60687 465 aaPredicted RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 EIF2S1P05198 315 aaKnown RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 PAMP19021 973 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 IMPA1P29218 277 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 CCNFP41002 786 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 FNTAP49354 379 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 CARSP49589 748 aaKnown RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 CDKN2DP55273 166 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 PER3P56645 1201 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 SARNPP82979 210 aaKnown RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 TAP2Q03519 686 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 TSTA3Q13630 321 aaPredicted RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 THOC5Q13769 683 aaKnown RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 PTK6Q13882 451 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 RBBP7Q16576 425 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 LONRF1Q17RB8 773 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 AGAP7PQ5VUJ5 663 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 PRAMEF13Q5VWM6 474 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 TRMT10BQ6PF06 316 aaKnown RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 KIRREL2Q6UWL6 708 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 LAPTM4BQ86VI4 370 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 PPIL6Q8IXY8 311 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 PRSS58Q8IYP2 241 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 ASB11Q8WXH4 323 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 AGAP4Q96P64 663 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 PLCD4Q9BRC7 762 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 SEMA3GQ9NS98 782 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 ABCF3Q9NUQ8 709 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 ZC3H7BQ9UGR2 993 aaKnown RBP10.39□□□□□ -0.75
RNF4-212ENST00000509258 IKZF3Q9UKT9 509 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 PYCARDQ9ULZ3 195 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 NTNG1Q9Y2I2 539 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 DHRS7Q9Y394 339 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 CACNA1DQ01668 2161 aa10.39□□□□□ -0.75
RNF4-212ENST00000509258 HAT1O14929 419 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
RNF4-212ENST00000509258 NRDCO43847 1150 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 MPC1LP0DKB6 136 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 SKIV2L2P42285 1042 aaKnown RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 TSFMP43897 325 aaKnown RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 MRPS25P82663 173 aaKnown RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 OCA2Q04671 838 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 HIF1AQ16665 826 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 SYT16Q17RD7 645 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 VWA2Q5GFL6 755 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 ICE2Q659A1 982 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 B3GNTL1Q67FW5 361 aaPredicted RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 PRMT9Q6P2P2 845 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 NEK10Q6ZWH5 1172 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 KCNMB4Q86W47 210 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 CREG2Q8IUH2 290 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 SLC34A3Q8N130 599 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
RNF4-212ENST00000509258 C2CD4AQ8NCU7 369 aaPredicted RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 SMPDL3AQ92484 453 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 KCNJ9Q92806 393 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 C8orf44Q96CB5 159 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 CAPZA3Q96KX2 299 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 OR2A5Q96R48 311 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 MACROD1Q9BQ69 325 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 TRIM51Q9BSJ1 452 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 SLC26A1Q9H2B4 701 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 MRPS30Q9NP92 439 aaKnown RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 UTP6Q9NYH9 597 aaKnown RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 RUVBL1Q9Y265 456 aaKnown RBP10.38□□□□□ -0.75
RNF4-212ENST00000509258 CROCCQ5TZA2 2017 aa10.38□□□□□ -0.75
RNF4-212ENST00000509258 MAGEB16A2A368 324 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 SMAPO00193 183 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 E2F3O00716 465 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 MAP2K7O14733 419 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 FOXS1O43638 330 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 VPS26AO75436 327 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 TSPAN12O95859 305 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 SYF2O95926 243 aaKnown RBP10.37□□□□□ -0.75
RNF4-212ENST00000509258 AHSGP02765 367 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 CATP04040 527 aaKnown RBP10.37□□□□□ -0.75
RNF4-212ENST00000509258 UQCRHP07919 91 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 CELA2AP08217 269 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PGAM1P18669 254 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 CMPK1P30085 196 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 RPA3P35244 121 aaPredicted RBP10.37□□□□□ -0.75
RNF4-212ENST00000509258 AP2B1P63010 937 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PRDX1Q06830 199 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms