RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 NDUFAF2Q8N183 169 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PELI3Q8N2H9 469 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 CHCHD4Q8N4Q1 142 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 NATD1Q8N6N6 113 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ARL6IP6Q8N6S5 226 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 C4orf32Q8N8J7 132 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SMRP1Q8NCR6 262 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 OR13F1Q8NGS4 319 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 MPLKIPQ8TAP9 179 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SETD6Q8TBK2 473 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 BRSK1Q8TDC3 778 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PHF10Q8WUB8 498 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TTC17Q96AE7 1141 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 LRRC39Q96DD0 335 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TRMT61AQ96FX7 289 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SH3YL1Q96HL8 342 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 EGLN2Q96KS0 407 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 B3GALT6Q96L58 329 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 RIPOR3Q96MK2 946 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF560Q96MR9 790 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SECISBP2Q96T21 854 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 GDF15Q99988 308 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DCUN1D5Q9BTE7 237 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 KIFC1Q9BW19 673 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 CHID1Q9BWS9 393 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TM2D2Q9BX73 214 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 VPS33BQ9H267 617 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ADNPQ9H2P0 1102 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 MUC13Q9H3R2 512 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ARMC7Q9H6L4 198 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SMYD3Q9H7B4 428 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DNAJC18Q9H819 358 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ACAD9Q9H845 621 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 FANCEQ9HB96 536 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 C6orf50Q9HD87 102 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SAYSD1Q9NPB0 183 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 RPRD1BQ9NQG5 326 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TAS2R7Q9NYW3 318 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 CCDC59Q9P031 241 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DNAJB11Q9UBS4 358 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DKK4Q9UBT3 224 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 VPS51Q9UID3 782 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SIRT4Q9Y6E7 314 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 MUC3AQ02505 3323 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 EMSYQ7Z589 1322 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 MYH3P11055 1940 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PSME4Q14997 1843 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 A0A1W2PPW3 197 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 EFCAB10A6NFE3 127 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 H0Y626 953 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 M0R3G1 203 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CCRL2O00421 344 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 TRDMT1O14717 391 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC9A3R1O14745 358 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 HOXC11O43248 304 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 FRS3O43559 492 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SNNO75324 88 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SEC14L2O76054 403 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 TGM6O95932 706 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PCCAP05165 728 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 IGKV5-2P06315 115 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PGK2P07205 417 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CD63P08962 238 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SNRPAP09012 282 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 TFPTP0C1Z6 253 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 MBL2P11226 248 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CCL5P13501 91 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 BTF3P20290 206 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 NR2F2P24468 414 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 IVDP26440 423 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ERP29P30040 261 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 GALNSP34059 522 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CDKN2AP42771 156 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 OR3A3P47888 321 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PSMD8P48556 350 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 JAK3P52333 1124 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 AP1S2P56377 157 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 FMO1Q01740 532 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF45Q02386 682 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PPARDQ03181 441 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 GALNT2Q10471 571 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SMARCB1Q12824 385 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 OVGP1Q12889 678 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 BNIP2Q12982 314 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PDIA2Q13087 525 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 GNA13Q14344 377 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PDK1Q15118 436 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 LRIT3Q3SXY7 679 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ALFQ53S48 1182 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 RBM48Q5RL73 367 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CCNYL2Q5T2Q4 361 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 C6orf52Q5T4I8 152 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 AGAP6Q5VW22 663 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 GPR107Q5VW38 600 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PLAG1Q6DJT9 500 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF790Q6PG37 636 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF773Q6PK81 442 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CORO6Q6QEF8 472 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CREB3L2Q70SY1 520 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SNX32Q86XE0 403 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms