RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SELENOKQ9Y6D0 94 aa4.47□□□□□ -1.69
GYPA-205ENST00000508337 PRSS21Q9Y6M0 314 aa4.47□□□□□ -1.69
GYPA-205ENST00000508337 RNF215Q9Y6U7 377 aa4.47□□□□□ -1.69
GYPA-205ENST00000508337 A0A1W2PPM1 405 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 URADA6NGE7 173 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 KPNA7A9QM74 516 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 C19orf81C9J6K1 198 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 DCXO43602 365 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 PLOD3O60568 738 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 DUS4LO95620 317 aaKnown RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 APOA4P06727 396 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 OR52Z1P0C646 297 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 FDPSP14324 419 aaKnown RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 TNNT2P45379 298 aaPredicted RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 MZT1Q08AG7 82 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 DRP2Q13474 957 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 TRIM29Q14134 588 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 COG2Q14746 738 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 ZNF74Q16587 644 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 XKR3Q5GH77 459 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 CCDC158Q5M9N0 1113 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 METTL7BQ6UX53 244 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 BTN2A1Q7KYR7 527 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 PI4KAP1Q8N8J0 262 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 CCDC63Q8NA47 563 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 TDRD5Q8NAT2 981 aaKnown RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 OR7A2PQ8NGA2 310 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 OR1L3Q8NH93 324 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 MGARPQ8TDB4 240 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 AZIN2Q96A70 460 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 C18orf12Q96KH6 178 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 RMDN2Q96LZ7 410 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 SYT11Q9BT88 431 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 ANP32EQ9BTT0 268 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 FGFBP2Q9BYJ0 223 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 SHARPINQ9H0F6 387 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 FN3KQ9H479 309 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 DBNDD1Q9H9R9 158 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 ZCCHC17Q9NP64 241 aaKnown RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 CCDC177Q9NQR7 707 aaPredicted RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 MAN2C1Q9NTJ4 1040 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 ERAP1Q9NZ08 941 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 NFKBIL1Q9UBC1 381 aaPredicted RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 PA2G4Q9UQ80 394 aaKnown RBP4.46□□□□□ -1.7
GYPA-205ENST00000508337 MOB4Q9Y3A3 225 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 IGSF1Q8N6C5 1336 aa4.46□□□□□ -1.7
GYPA-205ENST00000508337 C15orf61A6NNL5 157 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 H0YAE9 185 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 UBE2CO00762 179 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 SPRY1O43609 319 aaPredicted RBP4.45□□□□□ -1.7
GYPA-205ENST00000508337 KHDRBS3O75525 346 aaKnown RBP4.45□□□□□ -1.7
GYPA-205ENST00000508337 GSRP00390 522 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 STAG3L1P0CL83 205 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 RPL35AP18077 110 aaKnown RBP4.45□□□□□ -1.7
GYPA-205ENST00000508337 CYP11B2P19099 503 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 PRKACGP22612 351 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 OPRL1P41146 370 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 POLR2LP62875 67 aaKnown RBP4.45□□□□□ -1.7
GYPA-205ENST00000508337 CYCSP99999 105 aaKnown RBP4.45□□□□□ -1.7
GYPA-205ENST00000508337 OPCMLQ14982 345 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 PSMD6Q15008 389 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 FASTKD1Q53R41 847 aaKnown RBP4.45□□□□□ -1.7
GYPA-205ENST00000508337 XKR6Q5GH73 641 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 FCRLAQ7L513 359 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 CCDC186Q7Z3E2 898 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 AMIGO1Q86WK6 493 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 ARL6IP6Q8N6S5 226 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 IQUBQ8NA54 791 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 ZNRF4Q8WWF5 429 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 PGM2Q96G03 612 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 VMP1Q96GC9 406 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 NSMCE3Q96MG7 304 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 CCDC3Q9BQI4 270 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 SLC25A23Q9BV35 468 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 SLC2A11Q9BYW1 496 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 THAP2Q9H0W7 228 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 Q9H8V8 135 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 KIAA1210Q9ULL0 1709 aa4.45□□□□□ -1.7
GYPA-205ENST00000508337 TRAV24A0A0B4J272 114 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 IGKV3D-20A0A0C4DH25 116 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 CYSRT1A8MQ03 144 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 SNURFLB1AK76 121 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 IGHEP01854 428 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 ATP1B1P05026 303 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 CSN3P07498 182 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 TPM2P07951 284 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 KRT5P13647 590 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 ACAT1P24752 427 aaKnown RBP4.44□□□□□ -1.7
GYPA-205ENST00000508337 PSMA3P25788 255 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 HLA-FP30511 346 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 KIF5BP33176 963 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 SFTPDP35247 375 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 ATP6V1E1P36543 226 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 PEX19P40855 299 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 LEPRP48357 1165 aaKnown RBP4.44□□□□□ -1.7
GYPA-205ENST00000508337 BPIFB3P59826 476 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 SMC1AQ14683 1233 aaKnown RBP4.44□□□□□ -1.7
GYPA-205ENST00000508337 SLC1A5Q15758 541 aa4.44□□□□□ -1.7
GYPA-205ENST00000508337 MTHFSDQ2M296 383 aaKnown RBP4.44□□□□□ -1.7
GYPA-205ENST00000508337 LRRC73Q5JTD7 316 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms