RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 OXSMQ9NWU1 459 aa9.85□□□□□ -0.83
HTT-204ENST00000508321 NKIRAS1Q9NYS0 192 aa9.85□□□□□ -0.83
HTT-204ENST00000508321 PCTPQ9UKL6 214 aa9.85□□□□□ -0.83
HTT-204ENST00000508321 NEUROG3Q9Y4Z2 214 aa9.85□□□□□ -0.83
HTT-204ENST00000508321 MAP1BP46821 2468 aaKnown RBP9.85□□□□□ -0.83
HTT-204ENST00000508321 IGKV1-8A0A0C4DH67 115 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 TRBC2A0A5B9 178 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 TMEM120BA0PK00 339 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 E7EQ34 232 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 TXNDC9O14530 226 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 SPAG7O75391 227 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 ADRB1P08588 477 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 JMJD7P0C870 316 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 DHRS4L1P0CG22 281 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 CDH1P12830 882 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 MPSTP25325 297 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 HPDP32754 393 aaPredicted RBP9.84□□□□□ -0.83
HTT-204ENST00000508321 HNF4AP41235 474 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 CASP2P42575 452 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 LSSP48449 732 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 AGTR2P50052 363 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 FOXC1Q12948 553 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 LCP2Q13094 533 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 TARDBPQ13148 414 aaKnown RBP eCLIP9.84□□□□□ -0.83
HTT-204ENST00000508321 TUBB3Q13509 450 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 KIF26BQ2KJY2 2108 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 GGTA1PQ4G0N0 100 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 TTMPQ5BVD1 217 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 TCTE1Q5JU00 501 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 ZNF678Q5SXM1 525 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 YOD1Q5VVQ6 348 aaPredicted RBP9.84□□□□□ -0.83
HTT-204ENST00000508321 NXPE4Q6UWF7 544 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 CEACAM20Q6UY09 585 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 SLCO4C1Q6ZQN7 724 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 GOLGA7Q7Z5G4 137 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 ADCK2Q7Z695 626 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 FAM129CQ86XR2 697 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 KIRREL3Q8IZU9 778 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 ZNF655Q8N720 491 aaPredicted RBP9.84□□□□□ -0.83
HTT-204ENST00000508321 BMPERQ8N8U9 685 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 RCBTB1Q8NDN9 531 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 OR4K1Q8NGD4 311 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 PPP4R1Q8TF05 950 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 N4BP2L2Q92802 583 aaPredicted RBP9.84□□□□□ -0.83
HTT-204ENST00000508321 RERGQ96A58 199 aaPredicted RBP9.84□□□□□ -0.83
HTT-204ENST00000508321 REPS1Q96D71 796 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 PHF21BQ96EK2 531 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 ZNF382Q96SR6 550 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 ASPSCR1Q9BZE9 553 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 NT5DC2Q9H857 520 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 POLR1BQ9H9Y6 1135 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 KCNK9Q9NPC2 374 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 FBXO8Q9NRD0 319 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 ABCF3Q9NUQ8 709 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 SLC17A7Q9P2U7 560 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 PLCL2Q9UPR0 1127 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 TSC22D4Q9Y3Q8 395 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 PCDHGA3Q9Y5H0 932 aa9.84□□□□□ -0.83
HTT-204ENST00000508321 KCNE1BA0A087WTH5 132 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 EFCAB7A8K855 629 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 A8MU76 341 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 CASC3O15234 703 aaKnown RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 SRPX2O60687 465 aaPredicted RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 TRIM13O60858 407 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 DXOO77932 396 aaKnown RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 SUPT7LO94864 414 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 SIX3O95343 332 aaPredicted RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 ENO1P06733 434 aaKnown RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 BPGMP07738 259 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 EBLN1P0CF75 366 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 C1GALT1C1LP0DN25 315 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 PVRP15151 417 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 CREB1P16220 341 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 CD82P27701 267 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 AHRP35869 848 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 GDF5P43026 501 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 SERPINB4P48594 390 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 SEPHS1P49903 392 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 EMP3P54852 163 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 PKNOX1P55347 436 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 CSNK1G2P78368 415 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 PHEXP78562 749 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 SHC2P98077 582 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 MC2RQ01718 297 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 IRF8Q02556 426 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 GALNT1Q10472 559 aaPredicted RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 HIST2H2ACQ16777 129 aaPredicted RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 C18orf21Q32NC0 220 aaPredicted RBP9.83□□□□□ -0.84
HTT-204ENST00000508321 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.83□□□□□ -0.84
HTT-204ENST00000508321 XKR6Q5GH73 641 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 C3orf38Q5JPI3 329 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 CFAP157Q5JU67 520 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 LIPJQ5W064 366 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 FCRL6Q6DN72 434 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 HIST2H2AA3Q6FI13 130 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 GRHL2Q6ISB3 625 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 TLDC1Q6P9B6 456 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 FRMD7Q6ZUT3 714 aa9.83□□□□□ -0.84
HTT-204ENST00000508321 TRIM42Q8IWZ5 723 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms