RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 FMO4P31512 558 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 SOX11P35716 441 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 GRIA1P42261 906 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 PRDX1Q06830 199 aaKnown RBP19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 ZXDCQ2QGD7 858 aaPredicted RBP19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 ICE2Q659A1 982 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 XKRXQ6PP77 449 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 MICALCLQ6ZW33 695 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 NEK10Q6ZWH5 1172 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 EID3Q8N140 333 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 FAM98AQ8NCA5 519 aaKnown RBP19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 ZNF700Q9H0M5 742 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 TREX1Q9NSU2 369 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 STMN3Q9NZ72 180 aa19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 MARCH4Q9P2E8 410 aaPredicted RBP19.99■□□□□ 0.79
SQSTM1-210ENST00000506042 MDC1Q14676 2089 aaKnown RBP19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 TCRBV7S2A1N4TA0A589 114 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 PRAMEF2O60811 474 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 VAPBO95292 243 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 COX6B1P14854 86 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 SLC26A3P40879 764 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 PNLIPRP1P54315 467 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 SKP1P63208 163 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 ZNF33BQ06732 778 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 CCNG2Q16589 344 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 FAAH2Q6GMR7 532 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 HIBCHQ6NVY1 386 aaPredicted RBP19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 GABPB2Q8TAK5 448 aaPredicted RBP19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 C1orf54Q8WWF1 131 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 MAGED4Q96JG8 741 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 ZNF354BQ96LW1 612 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 C10orf90Q96M02 699 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 FAM129AQ9BZQ8 928 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 INTS10Q9NVR2 710 aaKnown RBP19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 TAC3Q9UHF0 121 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 RUVBL1Q9Y265 456 aaKnown RBP19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 POLEQ07864 2286 aa19.98■□□□□ 0.79
SQSTM1-210ENST00000506042 LOC102723996A0A087X1L8 192 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 PABPN1LA6NDY0 278 aaKnown RBP19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 H0YIG0 161 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 MYO1CO00159 1063 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 ZBTB14O43829 449 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 ERGP11308 486 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 AGTR2P50052 363 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 KCNK10P57789 538 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 TYSND1Q2T9J0 566 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 ZNF324BQ6AW86 544 aaPredicted RBP19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 LRRC8EQ6NSJ5 796 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 LRRC8BQ6P9F7 803 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 BNC2Q6ZN30 1099 aaPredicted RBP19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 MRGPRGQ86SM5 289 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 PLA2G3Q9NZ20 509 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 PCYOX1Q9UHG3 505 aa19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 TSR3Q9UJK0 312 aaKnown RBP19.97■□□□□ 0.79
SQSTM1-210ENST00000506042 DIDO1Q9BTC0 2240 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 A0A1W2PPV9 198 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 TTI1O43156 1089 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 PSIP1O75475 530 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 SYF2O95926 243 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 ENO3P13929 434 aaPredicted RBP19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 TDGF1P3P51864 188 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 THOC5Q13769 683 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 RPS6KA1Q15418 735 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 EXT1Q16394 746 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 KLHL38Q2WGJ6 581 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 FBXO42Q6P3S6 717 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 CASC4Q6P4E1 433 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 DRICH1Q6PGQ1 229 aaPredicted RBP19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 SUSD1Q6UWL2 747 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 PAQR7Q86WK9 346 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 KIFC1Q9BW19 673 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 PCBD2Q9H0N5 130 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 KLHL42Q9P2K6 505 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 RUVBL2Q9Y230 463 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 PCDHGB6Q9Y5F9 930 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 COMMD10Q9Y6G5 202 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 ZGRF1Q86YA3 2104 aa19.96■□□□□ 0.79
SQSTM1-210ENST00000506042 CROCCQ5TZA2 2017 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 CTAGE9A4FU28 777 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 SMAPO00193 183 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 CDK2AP1O14519 115 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 KIF5CO60282 957 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 NIPSNAP2O75323 286 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 WDPCPO95876 746 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 NMBRP28336 390 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 RPL22P35268 128 aaKnown RBP19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 GRK3P35626 688 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 CA7P43166 264 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 TAS2R50P59544 299 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 RPS15AP62244 130 aaKnown RBP19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 PTK6Q13882 451 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 BTBD16Q32M84 506 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 MINDY4Q4G0A6 757 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 CCSMST1Q4G0I0 132 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 KRTCAP3Q53RY4 240 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 KIAA0930Q6ICG6 404 aaPredicted RBP19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 LAPTM4BQ86VI4 370 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 TMEM151BQ8IW70 566 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 PALM2Q8IXS6 379 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 TMEM178AQ8NBL3 297 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms