RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 KLK4Q9Y5K2 254 aa4.9□□□□□ -1.63
HMGB1P3-201ENST00000502802 TEX264Q9Y6I9 313 aa4.9□□□□□ -1.63
HMGB1P3-201ENST00000502802 PTPRGP23470 1445 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 DISP1Q96F81 1524 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 SAA2-SAA4A0A096LPE2 208 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 RNF103-CHMP3A0A140T963 221 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 A0A1W2PN81 502 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 MYMKA6NI61 221 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 RNF103O00237 685 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 CAPN9O14815 690 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 PRPSAP2O60256 369 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 IGHV4-39P01824 125 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 IL10P22301 178 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 EPHA2P29317 976 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 CHRNA7P36544 502 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 CD86P42081 329 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 LUMP51884 338 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 CDH11P55287 796 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 B3GALT5-AS1P59052 145 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 MRPS21P82921 87 aaKnown RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 GFPT1Q06210 699 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 LTBQ06643 244 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 KIF5AQ12840 1032 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 MAPK11Q15759 364 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 KIF19Q2TAC6 998 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 SIRPB2Q5JXA9 342 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 KCTD8Q6ZWB6 473 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 CATSPER4Q7RTX7 472 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 PLD3Q8IV08 490 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 SERPINA12Q8IW75 414 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 NEK11Q8NG66 645 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 RNASE8Q8TDE3 154 aaKnown RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF473Q8WTR7 871 aaKnown RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 PHLDA1Q8WV24 401 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 TSACCQ96A04 125 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 RASL10BQ96S79 203 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 MAP3K3Q99759 626 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 URM1Q9BTM9 101 aaKnown RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 IDI2Q9BXS1 227 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 SDCBP2Q9H190 292 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 CUEDC2Q9H467 287 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 PHPT1Q9NRX4 125 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 FGF21Q9NSA1 209 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 PDRG1Q9NUG6 133 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 HOOK1Q9UJC3 728 aaKnown RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 NOCTQ9UK39 431 aaKnown RBP4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 STUB1Q9UNE7 303 aa4.89□□□□□ -1.63
HMGB1P3-201ENST00000502802 KDM6BO15054 1643 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZCCHC11Q5TAX3 1644 aaKnown RBP4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 IGLV5-45A0A087WSX0 123 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 A0A1W2PS18 150 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 C17orf105B2RV13 164 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 NPIPA3F8WFD2 350 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 XPNPEP2O43895 674 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 PRKRAO75569 313 aaKnown RBP4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 STAM2O75886 525 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 PIGNO95427 931 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 SP9P0CG40 484 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 CDH3P22223 829 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 SSTR1P30872 391 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 GLIPR1P48060 266 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 HOXA1P49639 335 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 PITX1P78337 314 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 LGALS3BPQ08380 585 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 TOR1AIP1Q5JTV8 583 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 PDSS1Q5T2R2 415 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 FUT10Q6P4F1 479 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 C9orf47Q6ZRZ4 202 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 TUBA1AQ71U36 451 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 MIER3Q7Z3K6 550 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 C1QL2Q7Z5L3 287 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 GPR141Q7Z602 305 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 SLC9B2Q86UD5 537 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 RTN4RL2Q86UN3 420 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF410Q86VK4 478 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 CROCCP3Q8IVE0 287 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 EID3Q8N140 333 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 HDDC3Q8N4P3 179 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 DNAJC22Q8N4W6 341 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 CLEC1AQ8NC01 280 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 OR52N5Q8NH56 324 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 OLIG1Q8TAK6 271 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 SLC13A3Q8WWT9 602 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 NEUROG1Q92886 237 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 CFAP36Q96G28 342 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 EPSTI1Q96J88 318 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 TSSK2Q96PF2 358 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 NDNQ99608 321 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 TUBA1CQ9BQE3 449 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 CCDC3Q9BQI4 270 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 ACPTQ9BZG2 426 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 LAT2Q9GZY6 243 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 UBQLN3Q9H347 655 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZBTB20Q9HC78 741 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 RPH3AQ9Y2J0 694 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 DHX29Q7Z478 1369 aaKnown RBP4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 TNIKQ9UKE5 1360 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 RAPGEF2Q9Y4G8 1499 aa4.88□□□□□ -1.63
HMGB1P3-201ENST00000502802 ABCC2Q92887 1545 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms