RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 OR2W5A6NFC9 320 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 E9PLN8 166 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 I3L1I5 382 aaPredicted RBP11.96□□□□□ -0.49
LMNA-218ENST00000502357 ASNA1O43681 348 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 NEURL1O76050 574 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 SUN1O94901 812 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 RPN2P04844 631 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 APOA4P06727 396 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 HEXBP07686 556 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
LMNA-218ENST00000502357 ICAM2P13598 275 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 CTNNA2P26232 953 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 HSF1Q00613 529 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 KLF1Q13351 362 aaPredicted RBP11.96□□□□□ -0.49
LMNA-218ENST00000502357 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.96□□□□□ -0.49
LMNA-218ENST00000502357 GARNL3Q5VVW2 1013 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 SPINK14Q6IE38 97 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 AFTPHQ6ULP2 937 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 CRLF3Q8IUI8 442 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 CSNK1A1LQ8N752 337 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 SLC35B2Q8TB61 432 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 AGAP11Q8TF27 550 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 MMABQ96EY8 250 aaPredicted RBP11.96□□□□□ -0.49
LMNA-218ENST00000502357 CYTH2Q99418 400 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 VKORC1Q9BQB6 163 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 ZNHIT6Q9NWK9 470 aaKnown RBP11.96□□□□□ -0.49
LMNA-218ENST00000502357 SPATA7Q9P0W8 599 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 MKL2Q9ULH7 1088 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 CDC14AQ9UNH5 594 aa11.96□□□□□ -0.49
LMNA-218ENST00000502357 NPIPA5E9PKD4 350 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 PRMT5O14744 637 aaPredicted RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 STK10O94804 968 aaKnown RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 SEC24DO94855 1032 aaPredicted RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 MAGEA1P43355 309 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 CASP6P55212 293 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 TPM4P67936 248 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 RELAQ04206 551 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 FAM53BQ14153 422 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 CTSL3PQ5NE16 218 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 ZNF468Q5VIY5 522 aaPredicted RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 C3P1Q6ZMU1 363 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 MEX3BQ6ZN04 569 aaKnown RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 PRSS41Q7RTY9 318 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 CPEB2Q7Z5Q1 589 aaKnown RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 SPNS2Q8IVW8 549 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 LRRC56Q8IYG6 542 aaPredicted RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 CABS1Q96KC9 395 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 BIRC8Q96P09 236 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 FERMT1Q9BQL6 677 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 CXXC4Q9H2H0 198 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 ANKRD10Q9NXR5 420 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
LMNA-218ENST00000502357 NPIPA1Q9UND3 350 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
LMNA-218ENST00000502357 ABCA2Q9BZC7 2435 aa11.95□□□□□ -0.5
LMNA-218ENST00000502357 SCN3AQ9NY46 2000 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 TCRBV7S2A1N4TA0A589 114 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 MACROD2A1Z1Q3 448 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 TTI1O43156 1089 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 C8orf89P0DMQ9 161 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 CD1EP15812 388 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 RPS3P23396 243 aaKnown RBP eCLIP11.94□□□□□ -0.57e-9■■■□□ 16.3
LMNA-218ENST00000502357 ADRA1DP25100 572 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 ALDH6A1Q02252 535 aaKnown RBP11.94□□□□□ -0.5
LMNA-218ENST00000502357 CDH17Q12864 832 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 OR1C1Q15619 314 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 CCDC181Q5TID7 509 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 SUSD1Q6UWL2 747 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 ANKRD37Q7Z713 158 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 PCGF5Q86SE9 256 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 TAB3Q8N5C8 712 aaPredicted RBP11.94□□□□□ -0.5
LMNA-218ENST00000502357 LRRC57Q8N9N7 239 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 SUN3Q8TAQ9 357 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 MAGED4Q96JG8 741 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 ZNF354BQ96LW1 612 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 ACAT2Q9BWD1 397 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 TRIM45Q9H8W5 580 aaPredicted RBP11.94□□□□□ -0.5
LMNA-218ENST00000502357 ETNK1Q9HBU6 452 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 GPAMQ9HCL2 828 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 KLHL1Q9NR64 748 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 TREX1Q9NSU2 369 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 GALPQ9UBC7 116 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 DUSP10Q9Y6W6 482 aa11.94□□□□□ -0.5
LMNA-218ENST00000502357 AKAP6Q13023 2319 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 FAM221AA4D161 298 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 A8MUI8 341 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 ARHGEF33A8MVX0 844 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 FAM227AF5H4B4 570 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 MYO1CO00159 1063 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 PRPF4O43172 522 aaKnown RBP eCLIP11.93□□□□□ -0.5
LMNA-218ENST00000502357 PSMD3O43242 534 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 PHF2O75151 1096 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 TOXO94900 526 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 SP1P08047 785 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 CYC1P08574 325 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 ARNTP27540 789 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 CMPK1P30085 196 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 AP2B1P63010 937 aa11.93□□□□□ -0.5
LMNA-218ENST00000502357 PRDX1Q06830 199 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms