RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 TRIP10Q15642 601 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 THEMIS2Q5TEJ8 643 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 DNAJC14Q6Y2X3 702 aaPredicted RBP17.58■□□□□ 0.4
LINC00535-201ENST00000501400 FAM9CQ8IZT9 166 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 C1orf52Q8N6N3 182 aaKnown RBP17.58■□□□□ 0.4
LINC00535-201ENST00000501400 LINC01555Q8NAE3 123 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 DENND6BQ8NEG7 585 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 OR2T34Q8NGX1 318 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 GFM2Q969S9 779 aaKnown RBP17.58■□□□□ 0.4
LINC00535-201ENST00000501400 PDXPQ96GD0 296 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 METTL2AQ96IZ6 378 aaKnown RBP17.58■□□□□ 0.4
LINC00535-201ENST00000501400 OR52E6Q96RD3 313 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 PKP2Q99959 881 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 KCTD14Q9BQ13 255 aaPredicted RBP17.58■□□□□ 0.4
LINC00535-201ENST00000501400 IKZF5Q9H5V7 419 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 COPS7BQ9H9Q2 264 aaPredicted RBP17.58■□□□□ 0.4
LINC00535-201ENST00000501400 DMRT3Q9NQL9 472 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 SPATA7Q9P0W8 599 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 RUVBL1Q9Y265 456 aaKnown RBP17.58■□□□□ 0.4
LINC00535-201ENST00000501400 PLXND1Q9Y4D7 1925 aa17.58■□□□□ 0.4
LINC00535-201ENST00000501400 PRSS38A1L453 326 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 SCAMP1O15126 338 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 ACSM2AQ08AH3 577 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 CLCA4Q14CN2 919 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 LRRC36Q1X8D7 754 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 GTDC1Q4AE62 458 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 PAGE2BQ5JRK9 111 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 OGFRL1Q5TC84 451 aaPredicted RBP17.57■□□□□ 0.4
LINC00535-201ENST00000501400 ACSM2BQ68CK6 577 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 IFNEQ86WN2 208 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 FAM129CQ86XR2 697 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 OR8J3Q8NGG0 315 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 FAM110BQ8TC76 370 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 CHTF18Q8WVB6 975 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 REPS1Q96D71 796 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 MSANTD3Q96H12 275 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 ACAT2Q9BWD1 397 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 TAC3Q9UHF0 121 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 MCM8Q9UJA3 840 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 MOSPD1Q9UJG1 213 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 MAN2B2Q9Y2E5 1009 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 LRP4O75096 1905 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 ZNF839A8K0R7 811 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 FOXE1O00358 373 aaPredicted RBP17.57■□□□□ 0.4
LINC00535-201ENST00000501400 HOXC4P09017 264 aaPredicted RBP17.57■□□□□ 0.4
LINC00535-201ENST00000501400 PSMB5P28074 263 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 PTPN6P29350 595 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 OR4D2P58180 307 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 MTAPQ13126 283 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 CCDC85BQ15834 202 aaPredicted RBP17.57■□□□□ 0.4
LINC00535-201ENST00000501400 UGT8Q16880 541 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 VN1R5Q7Z5H4 357 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 SYT12Q8IV01 421 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 TMEM102Q8N9M5 508 aaPredicted RBP17.57■□□□□ 0.4
LINC00535-201ENST00000501400 BMFQ96LC9 184 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 ECSITQ9BQ95 431 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 HAUS8Q9BT25 410 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 PAIP1Q9H074 479 aaKnown RBP17.57■□□□□ 0.4
LINC00535-201ENST00000501400 EBF1Q9UH73 591 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 NDRG2Q9UN36 371 aaKnown RBP17.57■□□□□ 0.4
LINC00535-201ENST00000501400 GPSM3Q9Y4H4 160 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 SNX13Q9Y5W8 968 aa17.57■□□□□ 0.4
LINC00535-201ENST00000501400 AQP12BA6NM10 295 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 SOX1O00570 391 aaPredicted RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 MTHFD1P11586 935 aaKnown RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 PCSK2P16519 638 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 S100A3P33764 101 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 C21orf58P58505 322 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 SFT2D3Q587I9 215 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 LRIF1Q5T3J3 769 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 C10orf62Q5T681 223 aaPredicted RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 AQP12AQ8IXF9 295 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 OR1E3Q8WZA6 343 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 LRGUKQ96M69 825 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 GAS2L1Q99501 681 aaPredicted RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 MUC13Q9H3R2 512 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 SLC2A4RGQ9NR83 387 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 IMP3Q9NV31 184 aaKnown RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 CUEDC1Q9NWM3 386 aaPredicted RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 USP36Q9P275 1121 aaKnown RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 PNMA8BQ9ULN7 279 aaPredicted RBP17.56■□□□□ 0.4
LINC00535-201ENST00000501400 AP4S1Q9Y587 144 aa17.56■□□□□ 0.4
LINC00535-201ENST00000501400 HEATR5BQ9P2D3 2071 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 OR52A4PA6NMU1 304 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 AKAP10O43572 662 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 SRFP11831 508 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 NCK1P16333 377 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 PRPS1L1P21108 318 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 HRH2P25021 359 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 HTR1EP28566 365 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 SLC7A1P30825 629 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 HSD17B2P37059 387 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 NFATC4Q14934 902 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 SPIN4Q56A73 249 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 GCNT7Q6ZNI0 430 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 ARMCX6Q7L4S7 300 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 SPPL2CQ8IUH8 684 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 FLCNQ8NFG4 579 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 GPR156Q8NFN8 814 aa17.55■□□□□ 0.4
LINC00535-201ENST00000501400 CANT1Q8WVQ1 401 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms