RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 FOPNLQ96NB1 174 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 SIGLEC12Q96PQ1 595 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 HES7Q9BYE0 225 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 DRC3Q9H069 523 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 ANKRD10Q9NXR5 420 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 TFR2Q9UP52 801 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 CPAMD8Q8IZJ3 1885 aa13.2□□□□□ -0.3
CCDC58-207ENST00000498466 IGHV3-20A0A0C4DH32 117 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 ZNHIT1O43257 154 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 PTMAP06454 111 aaKnown RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 CD46P15529 392 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 CCNFP41002 786 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 ST13P50502 369 aaKnown RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 EFNA3P52797 238 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 PRAMEP78395 509 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 MAT1AQ00266 395 aaKnown RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 CDH17Q12864 832 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 TUBA3CQ13748 450 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 FASTKQ14296 549 aaKnown RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 OR1C1Q15619 314 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 TSTD2Q5T7W7 516 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 MFSD4BQ5TF39 518 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 GARNL3Q5VVW2 1013 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 AADACL2Q6P093 401 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 TUBA3EQ6PEY2 450 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 C3P1Q6ZMU1 363 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 ZNF534Q76KX8 674 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 LDB1Q86U70 411 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 MAGEC3Q8TD91 643 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 RERGQ96A58 199 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 SDCCAG3Q96C92 435 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 PANX3Q96QZ0 392 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 PLCD4Q9BRC7 762 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 UTP23Q9BRU9 249 aaKnown RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 MRPS30Q9NP92 439 aaKnown RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 SPATA7Q9P0W8 599 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 TSR3Q9UJK0 312 aaKnown RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 ANAPC5Q9UJX4 755 aa13.19□□□□□ -0.3
CCDC58-207ENST00000498466 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-207ENST00000498466 A0A0U1RQJ8 604 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 ASPDHA6ND91 283 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 PRMT5O14744 637 aaPredicted RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 FOXS1O43638 330 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 ASNA1O43681 348 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 PHF2O75151 1096 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 TSPAN12O95859 305 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 ART1P52961 327 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 RWDD2BP57060 319 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 TSTA3Q13630 321 aaPredicted RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 MEP1AQ16819 746 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 MINDY4Q4G0A6 757 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 AARS2Q5JTZ9 985 aaKnown RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 PLAG1Q6DJT9 500 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 SPINK14Q6IE38 97 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 OTOAQ7RTW8 1153 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 CPEB2Q7Z5Q1 589 aaKnown RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 EID3Q8N140 333 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 GHDCQ8N2G8 530 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 TMEM178AQ8NBL3 297 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 FAM98AQ8NCA5 519 aaKnown RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 ZNF778Q96MU6 729 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 FRMD6Q96NE9 622 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 SYNPO2LQ9H987 977 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 C19orf25Q9UFG5 118 aaPredicted RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 PPT2Q9UMR5 302 aa13.18□□□□□ -0.3
CCDC58-207ENST00000498466 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
CCDC58-207ENST00000498466 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 E9PLN8 166 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 PRRG2O14669 202 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 KPNA5O15131 536 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 ADRA1DP25100 572 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 RPA3P35244 121 aaPredicted RBP13.17□□□□□ -0.3
CCDC58-207ENST00000498466 CD96P40200 585 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 AVPR1BP47901 424 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 GDF10P55107 478 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 HSF1Q00613 529 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 OC90Q02509 493 aaPredicted RBP13.17□□□□□ -0.3
CCDC58-207ENST00000498466 H3F3CQ6NXT2 135 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 SUSD1Q6UWL2 747 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 PPP1R21Q6ZMI0 780 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 LANCL3Q6ZV70 420 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 GALNTL5Q7Z4T8 443 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.17□□□□□ -0.3
CCDC58-207ENST00000498466 PAQR7Q86WK9 346 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 DOLPP1Q86YN1 238 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 CRLF3Q8IUI8 442 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 CNGA4Q8IV77 575 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 VSTM4Q8IW00 320 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 ACBD4Q8NC06 268 aa13.17□□□□□ -0.3
CCDC58-207ENST00000498466 SCMH1Q96GD3 660 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms