RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 IQCF5A8MTL0 148 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 UPK3BL1B0FP48 263 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 UPK3BL2E5RIL1 263 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 RETP07949 1114 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 EVI2BP34910 448 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 TIAL1Q01085 375 aaKnown RBP eCLIP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 BTN1A1Q13410 526 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 GRIK4Q16099 956 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 COMMD7Q86VX2 200 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 KRT73Q86Y46 540 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 RASAL3Q86YV0 1011 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC34A3Q8N130 599 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC9A7Q96T83 725 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 EGFL8Q99944 293 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 CRISPLD1Q9H336 500 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 CDCP1Q9H5V8 836 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF408Q9H9D4 720 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SP110Q9HB58 689 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF222Q9UK12 451 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 PIN4Q9Y237 131 aaKnown RBP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 CPSF4O95639 269 aaKnown RBP12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 CSF3P09919 207 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 CDKN1CP49918 316 aaPredicted RBP12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC14A1Q13336 389 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 EEF1AKMT1Q8WVE0 214 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 SH3KBP1Q96B97 665 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 CYP2S1Q96SQ9 504 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 FEVQ99581 238 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 TM9SF2Q99805 663 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 AARSD1Q9BTE6 412 aaKnown RBP12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 CMAHPQ9Y471 501 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 LOC102723532A0A0G2JNH3 316 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 WASHC1A8K0Z3 465 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 HNRNPCL2B2RXH8 293 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 HBP1O60381 514 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 PDE9AO76083 593 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 FCER2P06734 321 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 S100A3P33764 101 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 CDKN2CP42773 168 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 HSPA7P48741 367 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 MAN2A2P49641 1150 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 RORCP51449 518 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 CLCN7P51798 805 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 OLR1P78380 273 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 TMEM132CQ8N3T6 1108 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 B3GNT7Q8NFL0 401 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 OR9Q1Q8NGQ5 310 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 RHEBL1Q8TAI7 183 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 HASPINQ8TF76 798 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 TTC9Q92623 222 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 GTPBP3Q969Y2 492 aaKnown RBP12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 IL4I1Q96RQ9 567 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 FAM129BQ96TA1 746 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 C1QTNF6Q9BXI9 259 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 AGO3Q9H9G7 860 aaKnown RBP12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 MAN2B2Q9Y2E5 1009 aa12.68□□□□□ -0.38
GAPVD1-220ENST00000497580 A0A1W2PQL4 384 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 HAS3O00219 553 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 OPN1SWP03999 348 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 TAF6P49848 677 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 HK3P52790 923 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 MAB21L1Q13394 359 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 GALEQ14376 348 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 PIK3R6Q5UE93 754 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 SAXO2Q658L1 398 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 PM20D1Q6GTS8 502 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ANKRD54Q6NXT1 300 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ATP6V1C2Q8NEY4 427 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 LPCAT1Q8NF37 534 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 OR4L1Q8NH43 312 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ST8SIA2Q92186 375 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 FCRL2Q96LA5 508 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 C8orf48Q96LL4 319 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 TSGA13Q96PP4 275 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 SMIM14Q96QK8 99 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 MAGIXQ9H6Y5 334 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 MOXD2PA6NHM9 499 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 MUSKO15146 869 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 CYP17A1P05093 508 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 TRAPPC2P0DI81 140 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 TRAPPC2BP0DI82 140 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 SSTR2P30874 369 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 HCAR3P49019 387 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 CAV3P56539 151 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 FGFBP1Q14512 234 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 FBXO43Q4G163 708 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 MARC1Q5VT66 337 aa12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF57Q68EA5 555 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 TIGD7Q6NT04 549 aaPredicted RBP12.67□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF621Q6ZSS3 439 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms