RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	RALY	Q9UKM9	306 aa	Known RBP	9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	RNF112	Q9ULX5	631 aa		9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	SNX7	Q9UNH6	387 aa		9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	SSUH2	Q9Y2M2	353 aa		9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	PCDHGA4	Q9Y5G9	962 aa		9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	AP1M2	Q9Y6Q5	423 aa		9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	CACNA1G	O43497	2377 aa		9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	PIEZO2	Q9H5I5	2752 aa		9.41	□□□□□ -0.9
CALD1-223	ENST00000496024	FEZF1	A0PJY2	475 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	SMIM23	A6NLE4	172 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	SUPT3H	B4E1H0	165 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024		H3BMH7	237 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024		K7ENP7	123 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	NKX2-8	O15522	239 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	SUPT3H	O75486	399 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	WDR47	O94967	919 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	HBQ1	P09105	142 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	NPPB	P16860	134 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	CCND1	P24385	295 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TNFRSF8	P28908	595 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	KCNC1	P48547	511 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	HSPA7	P48741	367 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	RPS18	P62269	152 aa	Known RBP	9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	MEF2A	Q02078	507 aa	Predicted RBP	9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TGFBI	Q15582	683 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	FAM83E	Q2M2I3	478 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	ERCC6L	Q2NKX8	1250 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TCTE1	Q5JU00	501 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	ZNF425	Q6IV72	752 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	C16orf46	Q6P387	395 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TLDC1	Q6P9B6	456 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	INO80C	Q6PI98	192 aa	Predicted RBP	9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	LCTL	Q6UWM7	567 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TTLL10	Q6ZVT0	673 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	RNF44	Q7L0R7	432 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	GPR155	Q7Z3F1	870 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	ISCA2	Q86U28	154 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	DSEL	Q8IZU8	1212 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	CENPL	Q8N0S6	344 aa	Predicted RBP	9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	DTWD1	Q8N5C7	304 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	EIF1AD	Q8N9N8	165 aa	Known RBP	9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TTC29	Q8NA56	475 aa	Predicted RBP	9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	STARD8	Q92502	1023 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	RERG	Q96A58	199 aa	Predicted RBP	9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	KIAA1191	Q96A73	305 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	ESAM	Q96AP7	390 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	RHBDF1	Q96CC6	855 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	CABS1	Q96KC9	395 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	SCYL1	Q96KG9	808 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	OR4K3	Q96R72	315 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	HAUS8	Q9BT25	410 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	EPB41L4B	Q9H329	900 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	PRORY	Q9H606	182 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	SYNPO2L	Q9H987	977 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TMEM184C	Q9NVA4	438 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	ANKMY1	Q9P2S6	941 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	TBK1	Q9UHD2	729 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	SLC22A14	Q9Y267	594 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	DYRK1B	Q9Y463	629 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	KLK4	Q9Y5K2	254 aa		9.4	□□□□□ -0.9
CALD1-223	ENST00000496024	IGSF10	Q6WRI0	2623 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	HYKK	A2RU49	373 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	ZNF891	A8MT65	544 aa	Predicted RBP	9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	UBXN8	O00124	270 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	TAPBP	O15533	448 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	SRPX2	O60687	465 aa	Predicted RBP	9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	KLHL2	O95198	593 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	SHBG	P04278	402 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	SNRPA	P09012	282 aa	Known RBP	9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	EZR	P15311	586 aa	Known RBP	9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	AGXT	P21549	392 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	GCA	P28676	217 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	RORA	P35398	523 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	GRK3	P35626	688 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	HNMT	P50135	292 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	CCR8	P51685	355 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	RPS15	P62841	145 aa	Known RBP	9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	CSNK1G2	P78368	415 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	CDKL1	Q00532	357 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	NFKB2	Q00653	900 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	ERV3-1	Q14264	604 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	GRM7	Q14831	915 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	HKDC1	Q2TB90	917 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	CATSPERE	Q5SY80	951 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	ATP1A1-AS1	Q5TC04	95 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	LGSN	Q5TDP6	509 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	FAM69B	Q5VUD6	431 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	MLIP	Q5VWP3	458 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	RHBDD2	Q6NTF9	364 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	TMPRSS11B	Q86T26	416 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	PLD6	Q8N2A8	252 aa	Known RBP	9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	CSNK1A1L	Q8N752	337 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	SNX31	Q8N9S9	440 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	STAG3L4	Q8TBR4	150 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	SLC5A11	Q8WWX8	675 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	NEIL2	Q969S2	332 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	LRFN5	Q96NI6	719 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	MACROD1	Q9BQ69	325 aa		9.39	□□□□□ -0.91
CALD1-223	ENST00000496024	CCDC77	Q9BR77	488 aa		9.39	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms