RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 MAZP56270 477 aaKnown RBP12.18□□□□□ -0.46
VPS52-220ENST00000493674 BNIP3Q12983 259 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 CSTF3Q12996 717 aaKnown RBP12.18□□□□□ -0.46
VPS52-220ENST00000493674 IFT88Q13099 833 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 SLBPQ14493 270 aaKnown RBP eCLIP12.18□□□□□ -0.46
VPS52-220ENST00000493674 KIR2DS3Q14952 304 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 GALNTL6Q49A17 601 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 C14orf28Q4W4Y0 310 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 PAGE2BQ5JRK9 111 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 THEMIS2Q5TEJ8 643 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 ZNF425Q6IV72 752 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 IL27RAQ6UWB1 636 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 DDIASQ8IXT1 998 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 CPSF7Q8N684 471 aaKnown RBP12.18□□□□□ -0.46
VPS52-220ENST00000493674 KYQ8NBH2 561 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 SUMF1Q8NBK3 374 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 OR2L3Q8NG85 312 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 OR7G3Q8NG95 312 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 OR4E2Q8NGC2 313 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 SAP25Q8TEE9 199 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 JPH3Q8WXH2 748 aaPredicted RBP12.18□□□□□ -0.46
VPS52-220ENST00000493674 ERP27Q96DN0 273 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 PPP1R36Q96LQ0 422 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 RILPQ96NA2 401 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 CCDC106Q9BWC9 280 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 SLC6A20Q9NP91 592 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 RIC8BQ9NVN3 520 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 SLC6A14Q9UN76 642 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 PCDHGA5Q9Y5G8 931 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 PCDHGA11Q9Y5H2 935 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
VPS52-220ENST00000493674 SPTBP11277 2137 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ATP6AP2A0A1C7CYW4 349 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 PATE3B3GLJ2 98 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 SLC28A1O00337 649 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 SLC22A2O15244 555 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 PPM1DO15297 605 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 LRP3O75074 770 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ATP6AP2O75787 350 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 HRH2P25021 359 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ATP4BP51164 291 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 CCR8P51685 355 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 CSNK1G2P78368 415 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 IRX1P78414 480 aaPredicted RBP12.17□□□□□ -0.46
VPS52-220ENST00000493674 TSTA3Q13630 321 aaPredicted RBP12.17□□□□□ -0.46
VPS52-220ENST00000493674 NR1D2Q14995 579 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 PLCL1Q15111 1095 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 HLA-BQ31612 363 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 C6orf136Q5SQH8 315 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 TMEM198Q66K66 360 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 MED27Q6P2C8 311 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 SCIMPQ6UWF3 145 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 YTHDF3Q7Z739 585 aaKnown RBP12.17□□□□□ -0.46
VPS52-220ENST00000493674 MYLK4Q86YV6 388 aaPredicted RBP12.17□□□□□ -0.46
VPS52-220ENST00000493674 GBP7Q8N8V2 638 aaPredicted RBP12.17□□□□□ -0.46
VPS52-220ENST00000493674 SH3KBP1Q96B97 665 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 SLC22A18Q96BI1 424 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 FCRL1Q96LA6 429 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 OR2A14Q96R47 310 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ACAT2Q9BWD1 397 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ACPTQ9BZG2 426 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 RHBGQ9H310 441 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ELOVL6Q9H5J4 265 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 BRF2Q9HAW0 419 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ASIC5Q9NY37 505 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 NLGN3Q9NZ94 848 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 GIMAP2Q9UG22 337 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 ZFP69BQ9UJL9 534 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 TRIM33Q9UPN9 1127 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 DOLKQ9UPQ8 538 aa12.17□□□□□ -0.46
VPS52-220ENST00000493674 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
VPS52-220ENST00000493674 FER1L5A0AVI2 2057 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 TRBC2A0A5B9 178 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 OR5K3A6NET4 321 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 FOXE1O00358 373 aaPredicted RBP12.16□□□□□ -0.46
VPS52-220ENST00000493674 TNFSF14O43557 240 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 GFRA3O60609 400 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 RSL1D1O76021 490 aaKnown RBP12.16□□□□□ -0.46
VPS52-220ENST00000493674 UBOX5O94941 541 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 TBX6O95947 436 aaPredicted RBP12.16□□□□□ -0.46
VPS52-220ENST00000493674 UGT2B7P16662 529 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 LBPP18428 481 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 ADSLP30566 484 aaPredicted RBP12.16□□□□□ -0.46
VPS52-220ENST00000493674 PIK3CBP42338 1070 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 EPHA4P54764 986 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 ERVK-8P63133 956 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 KRT72Q14CN4 511 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 SLC5A12Q1EHB4 618 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 PLA2G2CQ5R387 149 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 KIAA1614Q5VZ46 1190 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 ADNP2Q6IQ32 1131 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 TMIGD1Q6UXZ0 262 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 PRR23BQ6ZRT6 265 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 VN1R5Q7Z5H4 357 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 SPATA19Q7Z5L4 167 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 PAQR7Q86WK9 346 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 TREML1Q86YW5 311 aa12.16□□□□□ -0.46
VPS52-220ENST00000493674 SLC35F3Q8IY50 421 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms