RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 IGLV5-45A0A087WSX0 123 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 GOLGA6L10A0A0M3HER8 536 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TEX22C9J3V5 150 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 K7ERI5 159 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 CLIC2O15247 247 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 IRAK2O43187 625 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 ZNHIT1O43257 154 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 SH3BP5O60239 455 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TADA2AO75478 443 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 B3GAT3O94766 335 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 ATF6P18850 670 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 NR1D1P20393 614 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 PAX3P23760 479 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 ADSSP30520 456 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 PGFP49763 221 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 EFNA5P52803 228 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 HMGN5P82970 282 aaKnown RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 EFNB1P98172 346 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 UBE3AQ05086 875 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TWF1Q12792 350 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 BFSP1Q12934 665 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 CUL4AQ13619 759 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 EFR3AQ14156 821 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TAF5Q15542 800 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TEAD2Q15562 447 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 UPP1Q16831 310 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM35AQ53FP2 167 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 WDR45BQ5MNZ6 344 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 PPM1LQ5SGD2 360 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TTI2Q6NXR4 508 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 SCARA5Q6ZMJ2 495 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 OTUD6AQ7L8S5 288 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 CBWD2Q8IUF1 395 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 LYG1Q8N1E2 194 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 STPG4Q8N801 248 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 SYT2Q8N9I0 419 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 ATAD1Q8NBU5 361 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 OR5B17Q8NGF7 314 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 HUS1BQ8NHY5 278 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 RSPH1Q8WYR4 309 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TM9SF4Q92544 642 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 CASP10Q92851 521 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 FGF13Q92913 245 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 DHX58Q96C10 678 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 DNAJC19Q96DA6 116 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 STAMBPL1Q96FJ0 436 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 SLC22A12Q96S37 553 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 ARPC5LQ9BPX5 153 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 NEURL2Q9BR09 285 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 PYGO2Q9BRQ0 406 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 LLPHQ9BRT6 129 aaKnown RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM175Q9BSA9 504 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TCHPQ9BT92 498 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 C1QTNF1Q9BXJ1 281 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 MRPL9Q9BYD2 267 aaKnown RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 MTMR12Q9C0I1 747 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 NT5C3AQ9H0P0 336 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 SDCBP2Q9H190 292 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 GOLPH3LQ9H4A5 285 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 DPEP3Q9H4B8 488 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TBC1D17Q9HA65 648 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 HINT3Q9NQE9 182 aaKnown RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 HEBP1Q9NRV9 189 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 MRPL17Q9NRX2 175 aaKnown RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 PRMT7Q9NVM4 692 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 OGFRQ9NZT2 677 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 MTRRQ9UBK8 725 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 HMGXB4Q9UGU5 601 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 TAGLN3Q9UI15 199 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 FBXL5Q9UKA1 691 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 CCL26Q9Y258 94 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 YIPF1Q9Y548 306 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 MYO15AQ9UKN7 3530 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 PTPRZ1P23471 2315 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-218ENST00000493430 CACNA1EQ15878 2313 aa2.96□□□□□ -1.94
PTCD3-218ENST00000493430 RP1P56715 2156 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 PCNX2A6NKB5 2137 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 GOLGA4Q13439 2230 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 ASXL3Q9C0F0 2248 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 A0A1B0GVL5 298 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TTC26A0AVF1 554 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 MTMR11A4FU01 709 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 CTAGE9A4FU28 777 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 HHLA1C9JL84 531 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 CLDN5O00501 218 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 EPB41L2O43491 1005 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 SYNGR3O43761 229 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 GCNT3O95395 438 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 IGHV4-39P01824 125 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TFP02787 698 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 CTAGE8P0CG41 777 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TRIM49P0CI25 452 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TRIM49CP0CI26 452 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 IRF1P10914 325 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 DCTP40126 519 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 LIG4P49917 911 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 TFAMQ00059 246 aaKnown RBP2.95□□□□□ -1.94
PTCD3-218ENST00000493430 SORDQ00796 357 aa2.95□□□□□ -1.94
PTCD3-218ENST00000493430 SIGLEC14Q08ET2 396 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms