RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NTSR2O95665 410 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CSF2P04141 144 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 FGF4P08620 206 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CSF3P09919 207 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ARSAP15289 507 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 GPD1P21695 349 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 PRKACGP22612 351 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 IGFBP5P24593 272 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 KLRK1P26718 216 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CHRNA5P30532 468 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 GRK5P34947 590 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 NRIP1P48552 1158 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 RORCP51449 518 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNQ1P51787 676 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 TKTL1P51854 596 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CLDN20P56880 219 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNK10P57789 538 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 RAB10P61026 200 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 BTG1P62324 171 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ALDH6A1Q02252 535 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 NFIAQ12857 509 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 DMP1Q13316 513 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 EXOSC2Q13868 293 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 BAATQ14032 418 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SIM2Q14190 667 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF79Q15937 498 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR33Q49SQ1 333 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 GTDC1Q4AE62 458 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM102BQ5T8I3 360 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 LCN1P1Q5VSP4 162 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 BSPRYQ5W0U4 402 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SAXO2Q658L1 398 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 LRRC66Q68CR7 880 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ANKRD34AQ69YU3 496 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 LAIR1Q6GTX8 287 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ANKRD54Q6NXT1 300 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 C19orf48Q6RUI8 117 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 KLHL17Q6TDP4 642 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SPATA19Q7Z5L4 167 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SNX20Q7Z614 316 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNMB4Q86W47 210 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 HS3ST5Q8IZT8 346 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM9CQ8IZT9 166 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 DTWD1Q8N5C7 304 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CDYL2Q8N8U2 506 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC37A3Q8NCC5 494 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SRFBP1Q8NEF9 429 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ACVR1CQ8NER5 493 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 BTN2A2Q8WVV5 523 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 KIAA1191Q96A73 305 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ISG20Q96AZ6 181 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 COQ8BQ96D53 544 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC47A1Q96FL8 570 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 LINC00052Q96N35 136 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CCDC115Q96NT0 180 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 COL21A1Q96P44 957 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 PPP1R2P1Q96PQ5 205 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CHCHD6Q9BRQ6 235 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 MARVELD1Q9BSK0 173 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 COPS4Q9BT78 406 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 HTATIP2Q9BUP3 242 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 DPCDQ9BVM2 203 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 PBX4Q9BYU1 374 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 GABARAPL1Q9H0R8 117 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 PIGUQ9H490 435 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ASB7Q9H672 318 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 MAGIXQ9H6Y5 334 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ACTR8Q9H981 624 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 FOLH1BQ9HBA9 442 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 TNFRSF12AQ9NP84 129 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 C11orf16Q9NQ32 467 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 KMT5AQ9NQR1 393 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SDHAF3Q9NRP4 125 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ANKEF1Q9NU02 776 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 RBFOX1Q9NWB1 397 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 SIRT5Q9NXA8 310 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ERAP1Q9NZ08 941 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 CD274Q9NZQ7 290 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 TRPM5Q9NZQ8 1165 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 REV1Q9UBZ9 1251 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 PSORS1C1Q9UIG5 152 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 FBXO10Q9UK96 956 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 BTRCQ9Y297 605 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 PKP3Q9Y446 797 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 ASB4Q9Y574 426 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 MAB21L2Q9Y586 359 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 PCDHGC4Q9Y5F7 938 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 RNF215Q9Y6U7 377 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 V9GYQ6 96 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 COL18A1P39060 1754 aa4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 COL5A2P05997 1499 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-206ENST00000489853 C2CD4BA6NLJ0 364 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MPTX1A8MV57 137 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 A8MXK9 166 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 H0YCG3 227 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 H7C2Y5 167 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC30A4O14863 429 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MUSKO15146 869 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MDM4O15151 490 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GSTA4O15217 222 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms