RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 RERGQ96A58 199 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 MIB2Q96AX9 1013 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 FER1L6-AS2Q96M78 137 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 RUNDC3BQ96NL0 473 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 PRAP1Q96NZ9 151 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 IP6K3Q96PC2 410 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 OR2A5Q96R48 311 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 MACROD1Q9BQ69 325 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 YIPF2Q9BWQ6 316 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 DPH5Q9H2P9 285 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 WDR54Q9H977 334 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 CCDC177Q9NQR7 707 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 ANKMY1Q9P2S6 941 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 G3BP2Q9UN86 482 aaKnown RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 MRPS2Q9Y399 296 aaKnown RBP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 HS3ST3B1Q9Y662 390 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
VTI1A-206ENST00000489142 COL12A1Q99715 3063 aa13.36□□□□□ -0.27
VTI1A-206ENST00000489142 SHANK1Q9Y566 2161 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 CCDC188H7C350 402 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 TSPAN12O95859 305 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 ONECUT2O95948 504 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 ALBP02768 609 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 C8GP07360 202 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 EZRP15311 586 aaKnown RBP13.35□□□□□ -0.27
VTI1A-206ENST00000489142 SAT1P21673 171 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 FDXRP22570 491 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 MMP11P24347 488 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 ITGA3P26006 1051 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 UQCRFS1P47985 274 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 RGS4P49798 205 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 KLC1Q07866 573 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 ZNF460Q14592 562 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 NAA25Q14CX7 972 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 RBBP7Q16576 425 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 SYT16Q17RD7 645 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 MUM1Q2TAK8 710 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 JMJD6Q6NYC1 403 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-206ENST00000489142 KIRREL2Q6UWL6 708 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 KIAA0408Q6ZU52 694 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 LAPTM4BQ86VI4 370 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 PALM2Q8IXS6 379 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 SHISA5Q8N114 240 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 Q8NA96 180 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 FBXO36Q8NEA4 188 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 GABPB2Q8TAK5 448 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-206ENST00000489142 CPT1CQ8TCG5 803 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 STT3BQ8TCJ2 826 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 MCOLN3Q8TDD5 553 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 C8orf44Q96CB5 159 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 SMAD5Q99717 465 aaKnown RBP13.35□□□□□ -0.27
VTI1A-206ENST00000489142 CRB3Q9BUF7 120 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 SLC26A1Q9H2B4 701 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 ZBTB20Q9HC78 741 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-206ENST00000489142 ENAMQ9NRM1 1142 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 MAP10Q9P2G4 905 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 IKZF3Q9UKT9 509 aa13.35□□□□□ -0.27
VTI1A-206ENST00000489142 A0A0A6YYC8 382 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 FEZF1A0PJY2 475 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 VSTM2BA6NLU5 285 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 I3L1I5 382 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 EIF3FO00303 357 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 DPM1O60762 260 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 SORBS2O94875 1100 aaKnown RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 ZGLP1P0C6A0 271 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 IL2P60568 153 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 ABATP80404 500 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 OCA2Q04671 838 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 NAE1Q13564 534 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 MYBPC3Q14896 1274 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 ZXDCQ2QGD7 858 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 VWA5B1Q5TIE3 1220 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 SLC6A19Q695T7 634 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 FAAH2Q6GMR7 532 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 AGTRAPQ6RW13 159 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 PARP9Q8IXQ6 854 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 ZBED8Q8IZ13 594 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 MIEF2Q96C03 454 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 PYCR2Q96C36 320 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 MMABQ96EY8 250 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 ZNF552Q9H707 407 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 PARVBQ9HBI1 364 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 TRPC4Q9UBN4 977 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 ZNF282Q9UDV7 671 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-206ENST00000489142 VWA7Q9Y334 891 aa13.34□□□□□ -0.27
VTI1A-206ENST00000489142 PRRC2CQ9Y520 2896 aaKnown RBP13.33□□□□□ -0.28
VTI1A-206ENST00000489142 RAD51CO43502 376 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 GUCA1CO95843 209 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 CDH1P12830 882 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 MEF2AQ02078 507 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-206ENST00000489142 SP140Q13342 867 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 LRRC8EQ6NSJ5 796 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 PRMT9Q6P2P2 845 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 TMEM207Q6UWW9 146 aa13.33□□□□□ -0.28
VTI1A-206ENST00000489142 PRSS41Q7RTY9 318 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms