RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CHKBQ9Y259 395 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 MOB4Q9Y3A3 225 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 KAT6BQ8WYB5 2073 aa3.03□□□□□ -1.92
RFC4-213ENST00000489028 C2CD4DB7Z1M9 353 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 RPL35AP18077 110 aaKnown RBP3.02□□□□□ -1.93
RFC4-213ENST00000489028 HLA-FP30511 346 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 PCGF2P35227 344 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 RAD52P43351 418 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 ASCL1P50553 236 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 UBASH3AP57075 661 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 ACSM1Q08AH1 577 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 RASGEF1BQ0VAM2 473 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 COX10Q12887 443 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 TRA2AQ13595 282 aaKnown RBP eCLIP3.02□□□□□ -1.93
RFC4-213ENST00000489028 CDH18Q13634 790 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 RAPSNQ13702 412 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 TMEM132DQ14C87 1099 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 C9orf152Q5JTZ5 239 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 CES4AQ5XG92 561 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 GPR139Q6DWJ6 353 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 FRRS1Q6ZNA5 592 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 RBPMS2Q6ZRY4 209 aaKnown RBP3.02□□□□□ -1.93
RFC4-213ENST00000489028 PRPF39Q86UA1 669 aaKnown RBP3.02□□□□□ -1.93
RFC4-213ENST00000489028 IQCHQ86VS3 1027 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 NDUFAF2Q8N183 169 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 XXYLT1Q8NBI6 393 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 PIK3R3Q92569 461 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 CNRIP1Q96F85 164 aaPredicted RBP3.02□□□□□ -1.93
RFC4-213ENST00000489028 SERINC2Q96SA4 455 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 PIH1D3Q9NQM4 214 aaKnown RBP3.02□□□□□ -1.93
RFC4-213ENST00000489028 WDR35Q9P2L0 1181 aa3.02□□□□□ -1.93
RFC4-213ENST00000489028 G3V2L1 256 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 H0YAE9 185 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 AP5Z1O43299 807 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 KRT33AO76009 404 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 GSRP00390 522 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 OR52Z1P0C646 297 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 SAGP10523 405 aaPredicted RBP3.01□□□□□ -1.93
RFC4-213ENST00000489028 PPP5CP53041 499 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 LIMK1P53667 647 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 CSE1LP55060 971 aaKnown RBP3.01□□□□□ -1.93
RFC4-213ENST00000489028 TMEM50BP56557 158 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 SLC8A3P57103 927 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 IRX4P78413 519 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 MYL7Q01449 175 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 PAX8Q06710 450 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 TRAP1Q12931 704 aaKnown RBP3.01□□□□□ -1.93
RFC4-213ENST00000489028 TAB1Q15750 504 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 FAM133BQ5BKY9 247 aaKnown RBP3.01□□□□□ -1.93
RFC4-213ENST00000489028 MFSD4BQ5TF39 518 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 DET1Q7L5Y6 550 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 P2RY8Q86VZ1 359 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 SPAG16Q8N0X2 631 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 RASGEF1AQ8N9B8 481 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 POMGNT2Q8NAT1 580 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 NUP37Q8NFH4 326 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 ATP8B4Q8TF62 1192 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 KCNE4Q8WWG9 221 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 SOSTQ9BQB4 213 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 OVOL2Q9BRP0 275 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 PI4K2AQ9BTU6 479 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 CENPOQ9BU64 300 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 PRRG4Q9BZD6 226 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 MTMR12Q9C0I1 747 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 TEX10Q9NXF1 929 aaPredicted RBP3.01□□□□□ -1.93
RFC4-213ENST00000489028 NKIRAS2Q9NYR9 191 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 MUTYHQ9UIF7 546 aa3.01□□□□□ -1.93
RFC4-213ENST00000489028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.01□□□□□ -1.93
RFC4-213ENST00000489028 TRBV4-1A0A0J9YWV2 114 aa3□□□□□ -1.93
RFC4-213ENST00000489028 MTMR11A4FU01 709 aa3□□□□□ -1.93
RFC4-213ENST00000489028 GLTPD2A6NH11 291 aa3□□□□□ -1.93
RFC4-213ENST00000489028 SHISA7A6NL88 538 aa3□□□□□ -1.93
RFC4-213ENST00000489028 SRRM5B3KS81 715 aa3□□□□□ -1.93
RFC4-213ENST00000489028 NPIPB9F8W1W9 429 aa3□□□□□ -1.93
RFC4-213ENST00000489028 CLDN4O14493 209 aa3□□□□□ -1.93
RFC4-213ENST00000489028 PLOD3O60568 738 aa3□□□□□ -1.93
RFC4-213ENST00000489028 SRSF10O75494 262 aaKnown RBP3□□□□□ -1.93
RFC4-213ENST00000489028 CPT2P23786 658 aa3□□□□□ -1.93
RFC4-213ENST00000489028 TSFMP43897 325 aaKnown RBP3□□□□□ -1.93
RFC4-213ENST00000489028 OR3A2P47893 321 aa3□□□□□ -1.93
RFC4-213ENST00000489028 MS4A2Q01362 244 aa3□□□□□ -1.93
RFC4-213ENST00000489028 CALD1Q05682 793 aaKnown RBP3□□□□□ -1.93
RFC4-213ENST00000489028 RBPJQ06330 500 aa3□□□□□ -1.93
RFC4-213ENST00000489028 TRIM29Q14134 588 aa3□□□□□ -1.93
RFC4-213ENST00000489028 NONOQ15233 471 aaKnown RBP eCLIP3□□□□□ -1.93
RFC4-213ENST00000489028 PTPN14Q15678 1187 aa3□□□□□ -1.93
RFC4-213ENST00000489028 CRY2Q49AN0 593 aa3□□□□□ -1.93
RFC4-213ENST00000489028 SUSD4Q5VX71 490 aa3□□□□□ -1.93
RFC4-213ENST00000489028 OR4C11Q6IEV9 310 aa3□□□□□ -1.93
RFC4-213ENST00000489028 ZNF774Q6NX45 483 aa3□□□□□ -1.93
RFC4-213ENST00000489028 LRTM2Q8N967 370 aa3□□□□□ -1.93
RFC4-213ENST00000489028 KCTD6Q8NC69 237 aa3□□□□□ -1.93
RFC4-213ENST00000489028 PROX1Q92786 737 aa3□□□□□ -1.93
RFC4-213ENST00000489028 PGAP3Q96FM1 320 aaPredicted RBP3□□□□□ -1.93
RFC4-213ENST00000489028 ATXN7L3BQ96GX2 97 aa3□□□□□ -1.93
RFC4-213ENST00000489028 FOXN4Q96NZ1 517 aa3□□□□□ -1.93
RFC4-213ENST00000489028 AGAP4Q96P64 663 aa3□□□□□ -1.93
RFC4-213ENST00000489028 LRRC3BQ96PB8 259 aa3□□□□□ -1.93
RFC4-213ENST00000489028 KLHL5Q96PQ7 755 aa3□□□□□ -1.93
RFC4-213ENST00000489028 SLF1Q9BQI6 1058 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms