RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	IRF3	Q14653	427 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TAB1	Q15750	504 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZNF79	Q15937	498 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	KYAT1	Q16773	422 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SETMAR	Q53H47	684 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ARMCX4	Q5H9R4	360 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZNF648	Q5T619	568 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ATF7IP2	Q5U623	682 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GPR139	Q6DWJ6	353 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LAIR1	Q6GTX8	287 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DENND1B	Q6P3S1	775 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LILRA6	Q6PI73	481 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	C19orf48	Q6RUI8	117 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TEX261	Q6UWH6	196 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LBX2	Q6XYB7	198 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CCDC149	Q6ZUS6	474 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SLC26A9	Q7LBE3	791 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ATG4D	Q86TL0	474 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TMC8	Q8IU68	726 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CNTN4	Q8IWV2	1026 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CDH26	Q8IXH8	852 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GDPD1	Q8N9F7	314 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GMCL1P1	Q8NEA9	526 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZNF680	Q8NEM1	530 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ACVR1C	Q8NER5	493 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	OR5K1	Q8NHB7	308 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CNIH3	Q8TBE1	160 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	KCTD4	Q8WVF5	259 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ASB15	Q8WXK1	588 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	POP5	Q969H6	163 aa	Known RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DACT3	Q96B18	629 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	C19orf60	Q96EN9	201 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	WBP1	Q96G27	269 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MSANTD3	Q96H12	275 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CCDC17	Q96LX7	622 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SAMD11	Q96NU1	681 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RAD9A	Q99638	391 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PITX2	Q99697	317 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	WAC	Q9BTA9	647 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SRR	Q9GZT4	340 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SLC6A15	Q9H2J7	730 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	POMK	Q9H5K3	350 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LDAH	Q9H6V9	325 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SMURF2	Q9HAU4	748 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LTB4R2	Q9NPC1	389 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	IL1RAP	Q9NPH3	570 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	IFT46	Q9NQC8	304 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ACSS2	Q9NR19	701 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DYRK4	Q9NR20	520 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ANKEF1	Q9NU02	776 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	C14orf119	Q9NWQ9	140 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ERVK13-1	Q9NX77	482 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GGA3	Q9NZ52	723 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	BTRC	Q9Y297	605 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MAN2B2	Q9Y2E5	1009 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	KLHL20	Q9Y2M5	609 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	KLK4	Q9Y5K2	254 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	FKBP7	Q9Y680	259 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RNF215	Q9Y6U7	377 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131		U3KQ87	197 aa		4.62	□□□□□ -1.67
CDC42BPA-213	ENST00000488131		A0A087X1B8	175 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131		A0A1W2PQ09	198 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131		A8MUA0	341 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PRSS44	E7EML9	344 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ARVCF	O00192	962 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NFIB	O00712	420 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PROM1	O43490	865 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MED7	O43513	233 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	KPNA6	O60684	536 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SEC22B	O75396	215 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	VPS26A	O75436	327 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RHOBTB1	O94844	696 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PGLS	O95336	258 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PAPLN	O95428	1278 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PGK1	P00558	417 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	HLA-DQB1	P01920	261 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LCK	P06239	509 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CKM	P06732	381 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TPO	P07202	933 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RET	P07949	1114 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ANXA6	P08133	673 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	AR	P10275	920 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SLC2A3	P11169	496 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NCK1	P16333	377 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	IL1RN	P18510	177 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GGT1	P19440	569 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CD72	P21854	359 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	KEL	P23276	732 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	HLA-F	P30511	346 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	HOXA13	P31271	388 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RPL9	P32969	192 aa	Known RBP	4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	IGFALS	P35858	605 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DCT	P40126	519 aa		4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RECQL	P46063	649 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZFP36L2	P47974	494 aa	Known RBP	4.61	□□□□□ -1.67

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