RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 LGALS3BPQ08380 585 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 DMP1Q13316 513 aaPredicted RBP4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 TNK1Q13470 666 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 SLMAPQ14BN4 828 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 NPTX1Q15818 432 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 MEP1BQ16820 701 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 CTU2Q2VPK5 515 aaKnown RBP4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 SLC27A1Q6PCB7 646 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 C9orf139Q6ZV77 190 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF771Q7L3S4 317 aaPredicted RBP4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 SNX32Q86XE0 403 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 MMD2Q8IY49 270 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 CDK20Q8IZL9 346 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 CIARTQ8N365 385 aaPredicted RBP4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 TMCO5AQ8N6Q1 288 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 NHLRC2Q8NBF2 726 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 ATAD1Q8NBU5 361 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 OR4K1Q8NGD4 311 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 PIGBQ92521 554 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 ALG14Q96F25 216 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 SLC47A1Q96FL8 570 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 FAM20AQ96MK3 541 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 PARK7Q99497 189 aaKnown RBP4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 MIS12Q9H081 205 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 SNX25Q9H3E2 840 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 TFB2MQ9H5Q4 396 aaKnown RBP4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 ERAP1Q9NZ08 941 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 ZDHHC2Q9UIJ5 367 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 AKAP12Q02952 1782 aa4.58□□□□□ -1.68
PRPF38A-203ENST00000487160 PARD3Q8TEW0 1356 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 HEG1Q9ULI3 1381 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 ANKRD61A6NGH8 418 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 BUB3O43684 328 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 STX6O43752 255 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 XPNPEP2O43895 674 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 ATP1A1P05023 1023 aaKnown RBP4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 AMD1P17707 334 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 MARK3P27448 753 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 PSMB4P28070 264 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 NR2C2P49116 596 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 CLDN15P56746 228 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 PTGISQ16647 500 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 ODF4Q2M2E3 257 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 FAM174BQ3ZCQ3 159 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 NRARPQ7Z6K4 114 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 NFE4Q86UQ8 179 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 HOOK3Q86VS8 718 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 CCDC170Q8IYT3 715 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 LGI2Q8N0V4 545 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 NUP93Q8N1F7 819 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 MAPKAPK5-AS1Q8N8E1 139 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 DNASE1L2Q92874 299 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 BSCL2Q96G97 398 aaPredicted RBP4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 TRMT61BQ9BVS5 477 aaKnown RBP4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 LAT2Q9GZY6 243 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 MINDY3Q9H8M7 445 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 Q9H8V8 135 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 LMAN1LQ9HAT1 526 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 GSN-AS1Q9NRJ2 163 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 SPHK1Q9NYA1 384 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 DONSONQ9NYP3 566 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 SEPT10Q9P0V9 454 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 TAAR2Q9P1P5 351 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 RIPK3Q9Y572 518 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 TRIM17Q9Y577 477 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 TNFRSF18Q9Y5U5 241 aa4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 PARP4Q9UKK3 1724 aaKnown RBP4.57□□□□□ -1.68
PRPF38A-203ENST00000487160 NUP155O75694 1391 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 SHANK3Q9BYB0 1731 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 PEAK1Q9H792 1746 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 DUXAA6NLW8 204 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 SLC30A4O14863 429 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ST8SIA3O43173 380 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 SELENOFO60613 162 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 PRAF2O60831 178 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 PRKRAO75569 313 aaKnown RBP4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 RPS6KA5O75582 802 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 LUC7L3O95232 432 aaKnown RBP4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 PGLSO95336 258 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 PIGNO95427 931 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 RLN1P04808 185 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 SPP1P10451 314 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 MYL6BP14649 208 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 CA4P22748 312 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 CD27P26842 260 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 TIA1P31483 386 aaKnown RBP eCLIP4.56□□□□□ -1.682e-6■■■□□ 17.7
PRPF38A-203ENST00000487160 MFAP3P55082 362 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ERVFC1-1P60608 527 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 C1QTNF8P60827 252 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ARL16Q0P5N6 197 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 TAF10Q12962 218 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 TAZQ16635 292 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 CDO1Q16878 200 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 TWISTNBQ3B726 338 aaPredicted RBP4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ANKRD20A4Q4UJ75 823 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ANKRD20A8PQ5CZ79 823 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ANKRD20A2Q5SQ80 823 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ANKRD20A1Q5TYW2 823 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ANKRD20A3Q5VUR7 823 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 GBP6Q6ZN66 633 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms