RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MECRQ9BV79 373 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 CCDC68Q9H2F9 335 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 EPB41L1Q9H4G0 881 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 CAB39LQ9H9S4 337 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 LHX9Q9NQ69 397 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 FBXO6Q9NRD1 293 aaPredicted RBP9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 RAD18Q9NS91 495 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 IMP3Q9NV31 184 aaKnown RBP9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 EPHA6Q9UF33 1036 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 TMCO1Q9UM00 188 aa9.08□□□□□ -0.96
TMEM39A-208ENST00000486159 PIPSLA2A3N6 862 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TARM1B6A8C7 271 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 H3BMM5 538 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 PHGDHO43175 533 aaKnown RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 NPHS1O60500 1241 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 NDUFS3O75489 264 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 CREG1O75629 220 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 UBOX5O94941 541 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 WISP3O95389 354 aaPredicted RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 MTHFD1P11586 935 aaKnown RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 ALOX15P16050 662 aaPredicted RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 POLR2CP19387 275 aaPredicted RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 ATP5F1P24539 256 aaPredicted RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 XIAPP98170 497 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 DMPKQ09013 629 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TUBB3Q13509 450 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 DNASE1L3Q13609 305 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 IL10RAQ13651 578 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 MAP7Q14244 749 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 KRT72Q14CN4 511 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 PLCL1Q15111 1095 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 GPR33Q49SQ1 333 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 METRNLQ641Q3 311 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 UGT3A1Q6NUS8 523 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 PIWIL4Q7Z3Z4 852 aaKnown RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 PPP1R3BQ86XI6 285 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 CEP97Q8IW35 865 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 HOMEZQ8IX15 550 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 CFAP206Q8IYR0 622 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 CENPLQ8N0S6 344 aaPredicted RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TMEM151AQ8N4L1 468 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 FITM2Q8N6M3 262 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 SIDT2Q8NBJ9 832 aaKnown RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 KCTD4Q8WVF5 259 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 ZDHHC12Q96GR4 267 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 SLC41A2Q96JW4 573 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 RMDN2Q96LZ7 410 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 C12orf66Q96MD2 445 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 AARSD1Q9BTE6 412 aaKnown RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TRMOQ9BU70 441 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TMEM120AQ9BXJ8 343 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TWSG1Q9GZX9 223 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 DRC3Q9H069 523 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 ILKAPQ9H0C8 392 aaPredicted RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 KLHL25Q9H0H3 589 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TRIT1Q9H3H1 467 aaKnown RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 ACTL8Q9H568 366 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 GPAMQ9HCL2 828 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 ABCF3Q9NUQ8 709 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 MRGBPQ9NV56 204 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 HRASLS2Q9NWW9 162 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TAS2R13Q9NYV9 303 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 SEMA5BQ9P283 1151 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 MARCH4Q9P2E8 410 aaPredicted RBP9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 VTI1BQ9UEU0 232 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 HAO1Q9UJM8 370 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 TUBD1Q9UJT1 453 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 PADI1Q9ULC6 663 aa9.07□□□□□ -0.96
TMEM39A-208ENST00000486159 A0A0G2JND7 137 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 OR6C74A6NCV1 312 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 OR5K3A6NET4 321 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 MASP2O00187 686 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 TOX3O15405 576 aaPredicted RBP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 HCRTR1O43613 425 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 UNC5CO95185 931 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 PRAMEF1O95521 474 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 HSPA4LO95757 839 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 ESR1P03372 595 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 CTSBP07858 339 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 SPTBP11277 2137 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 MSH3P20585 1137 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 SAT1P21673 171 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RPS3P23396 243 aaKnown RBP eCLIP9.06□□□□□ -0.965e-7■□□□□ 10.4
TMEM39A-208ENST00000486159 AKT1P31749 480 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 HALP42357 657 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 GCGRP47871 477 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 UQCRFS1P47985 274 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RIPPLY3P57055 190 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 FOXL2P58012 376 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 ATP6V0D1P61421 351 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 IRF9Q00978 393 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 GALNT1Q10472 559 aaPredicted RBP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 PRKAA1Q13131 559 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 ITGA9Q13797 1035 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 UBAP2LQ14157 1087 aaKnown RBP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 RCN2Q14257 317 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 IL11RAQ14626 422 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 TECRLQ5HYJ1 363 aa9.06□□□□□ -0.96
TMEM39A-208ENST00000486159 LDLRAP1Q5SW96 308 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms