RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 MMP24Q9Y5R2 645 aa4.14□□□□□ -1.75
SMARCC1-207ENST00000485833 LYVE1Q9Y5Y7 322 aa4.14□□□□□ -1.75
SMARCC1-207ENST00000485833 ITPR1Q14643 2758 aa4.14□□□□□ -1.75
SMARCC1-207ENST00000485833 BAZ2AQ9UIF9 1905 aaKnown RBP4.14□□□□□ -1.75
SMARCC1-207ENST00000485833 STK36Q9NRP7 1315 aa4.14□□□□□ -1.75
SMARCC1-207ENST00000485833 DSPP15924 2871 aaKnown RBP4.14□□□□□ -1.75
SMARCC1-207ENST00000485833 RALGAPA2Q2PPJ7 1873 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 WDFY3Q8IZQ1 3526 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 AKAP13Q12802 2813 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 FANCMQ8IYD8 2048 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 A0A087X002 238 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 A0A1B0GUL7 405 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 LOC730098B7Z3J9 87 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 F5H0A9 414 aaPredicted RBP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 PLOD2O00469 737 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 NDUFS4O43181 175 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 EPB41L2O43491 1005 aaKnown RBP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 GJB5O95377 273 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 CEACAM1P13688 526 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 ZNF26P17031 533 aaPredicted RBP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 SP100P23497 879 aaPredicted RBP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 TAF6P49848 677 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 CDH8P55286 799 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 CNTN2Q02246 1040 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 SIGLEC14Q08ET2 396 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 WDR43Q15061 677 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 ZFP69Q49AA0 526 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 CCDC184Q52MB2 194 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 ALS2CLQ60I27 953 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 ADGRD2Q7Z7M1 963 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 WDTC1Q8N5D0 677 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 FAM133AQ8N9E0 248 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 DDHD1Q8NEL9 900 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 SCFD2Q8WU76 684 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 ZNF582Q96NG8 517 aaPredicted RBP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 FTOQ9C0B1 505 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 SLA2Q9H6Q3 261 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 FGF22Q9HCT0 170 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 PIH1D3Q9NQM4 214 aaKnown RBP4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 PNMA2Q9UL42 364 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 IL16Q14005 1332 aa4.13□□□□□ -1.75
SMARCC1-207ENST00000485833 PLXNA4Q9HCM2 1894 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 PGPEP1LA6NFU8 196 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 OR6C76A6NM76 312 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 PI15O43692 258 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 NADKO95544 446 aaPredicted RBP4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 RB1P06400 928 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 ACADMP11310 421 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 KRT5P13647 590 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 AKR1B1P15121 316 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 RPS18P62269 152 aaKnown RBP4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 IRX1P78414 480 aaPredicted RBP4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 KCNJ10P78508 379 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 PPP2R2BQ00005 443 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 GABPAQ06546 454 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 TFCP2Q12800 502 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 EPC2Q52LR7 807 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 ADALQ6DHV7 355 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 CHST9Q7L1S5 443 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 FBXO16Q8IX29 292 aaPredicted RBP4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 PPHLN1Q8NEY8 458 aaKnown RBP4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 DYNLL2Q96FJ2 89 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 ZNF599Q96NL3 588 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 UPF3BQ9BZI7 483 aaKnown RBP4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 PELI2Q9HAT8 420 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 HOXC10Q9NYD6 342 aa4.12□□□□□ -1.75
SMARCC1-207ENST00000485833 SMG1Q96Q15 3661 aaKnown RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 A0A1W2PR77 199 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 CDRT15L2A8MXV6 281 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 MPHOSPH10O00566 681 aaKnown RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 USO1O60763 962 aaKnown RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 ZNF821O75541 412 aaPredicted RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 CIAO1O76071 339 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 SLC25A27O95847 323 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 DNAJB1P25685 340 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 NMBRP28336 390 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 LUMP51884 338 aaPredicted RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 PRKAA1Q13131 559 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 GPM6BQ13491 265 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 TUBB2AQ13885 445 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 GTDC1Q4AE62 458 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 FFAR4Q5NUL3 377 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 GCNT6Q5T4J0 391 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 FAAH2Q6GMR7 532 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 SNRNP48Q6IEG0 339 aaKnown RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 NAA16Q6N069 864 aaPredicted RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 MCEMP1Q8IX19 187 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 MAPK1IP1LQ8NDC0 245 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 VN1R2Q8NFZ6 395 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 RPGRIP1Q96KN7 1286 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 RAD9AQ99638 391 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 OPRPNQ99935 248 aaPredicted RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 TUBB2BQ9BVA1 445 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 WDR13Q9H1Z4 485 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 VCPKMTQ9H867 229 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 ERVMER34-1Q9H9K5 563 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 RAVER2Q9HCJ3 691 aaKnown RBP4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 CACNG5Q9UF02 275 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 AMACRQ9UHK6 382 aa4.11□□□□□ -1.75
SMARCC1-207ENST00000485833 SLC7A7Q9UM01 511 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms