RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 BNIP2Q12982 314 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 KRT33BQ14525 404 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 UAP1L1Q3KQV9 507 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 SPIN4Q56A73 249 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 PTCRAQ6ISU1 281 aaPredicted RBP16.11■□□□□ 0.17
CTSA-207ENST00000484855 RNF111Q6ZNA4 994 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 GCNT7Q6ZNI0 430 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 SYT12Q8IV01 421 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 UBE2E3Q969T4 207 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 PPM1MQ96MI6 270 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 TMEM74Q96NL1 305 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 OR52E6Q96RD3 313 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 CGREF1Q99674 301 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 ALG2Q9H553 416 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 PRDM8Q9NQV8 689 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 NMRK1Q9NWW6 199 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 DUSP12Q9UNI6 340 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 OR52A4PA6NMU1 304 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 NVLO15381 856 aaKnown RBP16.1■□□□□ 0.17
CTSA-207ENST00000484855 LRATO95237 230 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 APBB3O95704 486 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 MUM1Q2TAK8 710 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 CYP2R1Q6VVX0 501 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 DHFR2Q86XF0 187 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 KRT78Q8N1N4 520 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 C1orf52Q8N6N3 182 aaKnown RBP16.1■□□□□ 0.17
CTSA-207ENST00000484855 GTF2H4Q92759 462 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 TESCQ96BS2 214 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 EGLN2Q96KS0 407 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 LRGUKQ96M69 825 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 CAMK1GQ96NX5 476 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 PCBD2Q9H0N5 130 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 DMRT3Q9NQL9 472 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 CYP8B1Q9UNU6 501 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 HEATR5BQ9P2D3 2071 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 FOXE1O00358 373 aaPredicted RBP16.1■□□□□ 0.17
CTSA-207ENST00000484855 C8BP07358 591 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 S100A3P33764 101 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 GSK3BP49841 420 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 EEFSECP57772 596 aaKnown RBP16.1■□□□□ 0.17
CTSA-207ENST00000484855 PHEXP78562 749 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 LIPEQ05469 1076 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 SF1Q15637 639 aaKnown RBP16.1■□□□□ 0.17
CTSA-207ENST00000484855 TPRG1LQ5T0D9 272 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 ANO7Q6IWH7 933 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 SYT13Q7L8C5 426 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 GPR156Q8NFN8 814 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 GFM2Q969S9 779 aaKnown RBP16.1■□□□□ 0.17
CTSA-207ENST00000484855 PELI2Q9HAT8 420 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 PPT2Q9UMR5 302 aa16.1■□□□□ 0.17
CTSA-207ENST00000484855 PLXND1Q9Y4D7 1925 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 IGLV3-19P01714 112 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 PRPS1L1P21108 318 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 PSMB5P28074 263 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 RAB28P51157 221 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 CTBSQ01459 385 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 PGS1Q32NB8 556 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 LEXMQ3ZCV2 418 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 LPCAT2Q7L5N7 544 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 RD3Q7Z3Z2 195 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 IFNEQ86WN2 208 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 RIMKLAQ8IXN7 391 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 CDC26Q8NHZ8 85 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 CHTF18Q8WVB6 975 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 C11orf24Q96F05 449 aaPredicted RBP16.09■□□□□ 0.17
CTSA-207ENST00000484855 ANKRD27Q96NW4 1050 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 KCTD14Q9BQ13 255 aaPredicted RBP16.09■□□□□ 0.17
CTSA-207ENST00000484855 RAB11FIP5Q9BXF6 653 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 C6orf106Q9H6K1 298 aaPredicted RBP16.09■□□□□ 0.17
CTSA-207ENST00000484855 MVB12BQ9H7P6 319 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 A0A1W2PPV9 198 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 PRMT3O60678 531 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 PKLRP30613 574 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 MTPNP58546 118 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 RAE1P78406 368 aaKnown RBP16.09■□□□□ 0.17
CTSA-207ENST00000484855 LRRC32Q14392 662 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 TMIGD1Q6UXZ0 262 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 DNAJC14Q6Y2X3 702 aaPredicted RBP16.09■□□□□ 0.17
CTSA-207ENST00000484855 FAM129CQ86XR2 697 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 LINC01555Q8NAE3 123 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 ZNF740Q8NDX6 193 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 TSACCQ96A04 125 aaPredicted RBP16.09■□□□□ 0.17
CTSA-207ENST00000484855 CDX2Q99626 313 aaPredicted RBP16.09■□□□□ 0.17
CTSA-207ENST00000484855 TRIM15Q9C019 465 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 RMND5AQ9H871 391 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 LMAN1LQ9HAT1 526 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 EGFL7Q9UHF1 273 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 NEUROG3Q9Y4Z2 214 aa16.09■□□□□ 0.17
CTSA-207ENST00000484855 CHURC1-FNTBB4DL54 471 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 AKAP10O43572 662 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 MTHFD1P11586 935 aaKnown RBP16.08■□□□□ 0.16
CTSA-207ENST00000484855 ATP6V1B2P21281 511 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 TIA1P31483 386 aaKnown RBP eCLIP16.08■□□□□ 0.16
CTSA-207ENST00000484855 PIK3CBP42338 1070 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 YPEL5P62699 121 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 RHDQ02161 417 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 TCEA2Q15560 299 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 RPE65Q16518 533 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 PQLC1Q8N2U9 271 aa16.08■□□□□ 0.16
CTSA-207ENST00000484855 SYNPOQ8N3V7 929 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms