RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ST8SIA3O43173 380 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 RTN2O75298 545 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 PRKRAO75569 313 aaKnown RBP6.07□□□□□ -1.44
UBR3-210ENST00000484596 PGLSO95336 258 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 PNPP00491 289 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 SAGP10523 405 aaPredicted RBP6.07□□□□□ -1.44
UBR3-210ENST00000484596 ST8SIA6P61647 398 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 RPA4Q13156 261 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 KRTAP27-1Q3LI81 207 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 TMEM270Q6UE05 265 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 TMPRSS11BQ86T26 416 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 STPG4Q8N801 248 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 NPEPL1Q8NDH3 523 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 DBF4BQ8NFT6 615 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 FGFBP3Q8TAT2 258 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 PDLIM5Q96HC4 596 aaKnown RBP6.07□□□□□ -1.44
UBR3-210ENST00000484596 SPATA33Q96N06 139 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 ATP6V0BQ99437 205 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 HNRNPABQ99729 332 aaKnown RBP6.07□□□□□ -1.44
UBR3-210ENST00000484596 PSD2Q9BQI7 771 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 LMAN1LQ9HAT1 526 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 PELI2Q9HAT8 420 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 CDH20Q9HBT6 801 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 GKN1Q9NS71 199 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 MOSPD1Q9UJG1 213 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 TCF19Q9Y242 345 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 TRIM17Q9Y577 477 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 ABCC1P33527 1531 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 EEA1Q15075 1411 aa6.07□□□□□ -1.44
UBR3-210ENST00000484596 GREB1LQ9C091 1923 aaPredicted RBP6.06□□□□□ -1.44
UBR3-210ENST00000484596 A0A0G2JLW4 131 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CYSRT1A8MQ03 144 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 SELENOFO60613 162 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CSN3P07498 182 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 ITIH1P19827 911 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 TIA1P31483 386 aaKnown RBP eCLIP6.06□□□□□ -1.44
UBR3-210ENST00000484596 CASP3P42574 277 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CLK1P49759 484 aaKnown RBP6.06□□□□□ -1.44
UBR3-210ENST00000484596 DLK1P80370 383 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 MAT1AQ00266 395 aaKnown RBP6.06□□□□□ -1.44
UBR3-210ENST00000484596 TNK1Q13470 666 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CUL3Q13618 768 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 FAM174BQ3ZCQ3 159 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 KBTBD12Q3ZCT8 623 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 TXNRD3NBQ6F5E7 133 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CASC4Q6P4E1 433 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CLYBLQ8N0X4 340 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 DNAJC22Q8N4W6 341 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CNBD1Q8NA66 436 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 PI4K2AQ9BTU6 479 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 CACNG6Q9BXT2 260 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 ZNF350Q9GZX5 532 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 Q9N2K0 584 aa6.06□□□□□ -1.44
UBR3-210ENST00000484596 IARS2Q9NSE4 1012 aaKnown RBP6.06□□□□□ -1.44
UBR3-210ENST00000484596 DNAJC17Q9NVM6 304 aaKnown RBP6.06□□□□□ -1.44
UBR3-210ENST00000484596 PCDH11YQ9BZA8 1340 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 MROH2AA6NES4 1674 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 MAGI2Q86UL8 1455 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 DUXAA6NLW8 204 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 LINC01565O15544 149 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 PCDH7O60245 1069 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 TSHBP01222 138 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 SPP1P10451 314 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 HSPA8P11142 646 aaKnown RBP6.05□□□□□ -1.44
UBR3-210ENST00000484596 MNDAP41218 407 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 KHKP50053 298 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 TEFQ10587 303 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 LASP1Q14847 261 aaKnown RBP6.05□□□□□ -1.44
UBR3-210ENST00000484596 SLC39A12Q504Y0 691 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 ZC2HC1CQ53FD0 456 aaPredicted RBP6.05□□□□□ -1.44
UBR3-210ENST00000484596 LBHQ53QV2 105 aaPredicted RBP6.05□□□□□ -1.44
UBR3-210ENST00000484596 KCTD9Q7L273 389 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 NUP54Q7Z3B4 507 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 GRHL3Q8TE85 626 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 FLRT3Q9NZU0 649 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.05□□□□□ -1.44
UBR3-210ENST00000484596 ISY1Q9ULR0 285 aaKnown RBP6.05□□□□□ -1.44
UBR3-210ENST00000484596 PLCH2O75038 1416 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 SAMD9LQ8IVG5 1584 aa6.05□□□□□ -1.44
UBR3-210ENST00000484596 ZNF142P52746 1687 aaPredicted RBP6.04□□□□□ -1.44
UBR3-210ENST00000484596 RTCAO00442 366 aaKnown RBP6.04□□□□□ -1.44
UBR3-210ENST00000484596 LUC7L3O95232 432 aaKnown RBP6.04□□□□□ -1.44
UBR3-210ENST00000484596 HMOX1P09601 288 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 SMIM18P0DKX4 95 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 UROSP10746 265 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 LBPP18428 481 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 EFNA1P20827 205 aaPredicted RBP6.04□□□□□ -1.44
UBR3-210ENST00000484596 HSD17B3P37058 310 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 RGS7P49802 495 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 GMPSP49915 693 aaPredicted RBP6.04□□□□□ -1.44
UBR3-210ENST00000484596 DMPKQ09013 629 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 CBX3Q13185 183 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 ODF4Q2M2E3 257 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 SPOUT1Q5T280 376 aaKnown RBP6.04□□□□□ -1.44
UBR3-210ENST00000484596 RAB12Q6IQ22 244 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 NOTUMQ6P988 496 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 CEACAM20Q6UY09 585 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 TRPT1Q86TN4 253 aaKnown RBP6.04□□□□□ -1.44
UBR3-210ENST00000484596 ISCA2Q86U28 154 aa6.04□□□□□ -1.44
UBR3-210ENST00000484596 THAP8Q8NA92 274 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms