RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SNX7Q9UNH6 387 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 FREM2Q5SZK8 3169 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 CLGNO14967 610 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 SUPT7LO94864 414 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 TNFSF15O95150 251 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 STATHP02808 62 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 CCR8P51685 355 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 CDH13P55290 713 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 HERVK_113P63132 956 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 CSNK1G2P78368 415 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 GTF2H2Q13888 395 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 AGBL2Q5U5Z8 902 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 FRMPD2BQ6IN97 320 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 GTF2H2CQ6P1K8 395 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 MYLK4Q86YV6 388 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-224ENST00000483359 C10orf107Q8IVU9 208 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 ANKRD42Q8N9B4 389 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 RDH11Q8TC12 318 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 ATP6V1G3Q96LB4 118 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 SELENOSQ9BQE4 189 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 ERVK-6Q9BXR3 956 aa17.1■□□□□ 0.33
CPNE1-224ENST00000483359 SSU72Q9NP77 194 aaKnown RBP17.1■□□□□ 0.33
CPNE1-224ENST00000483359 SEMA4BQ9NPR2 832 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-224ENST00000483359 POLR1CO15160 346 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-224ENST00000483359 RPS17P08708 135 aaKnown RBP17.09■□□□□ 0.33
CPNE1-224ENST00000483359 HPDP32754 393 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ACY1Q03154 408 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 MPP2Q14168 576 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 NAA25Q14CX7 972 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 XKR6Q5GH73 641 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ZNF678Q5SXM1 525 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 NXPE4Q6UWF7 544 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 SLC22A9Q8IVM8 553 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 CCNYL1Q8N7R7 359 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ZNF740Q8NDX6 193 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 PPP4R1Q8TF05 950 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 PRR11Q96HE9 360 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-224ENST00000483359 PKNOX2Q96KN3 472 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ZFYVE21Q9BQ24 234 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ACBD3Q9H3P7 528 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 POLR1BQ9H9Y6 1135 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 FANCEQ9HB96 536 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 TMEM184CQ9NVA4 438 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ANKMY1Q9P2S6 941 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 MID2Q9UJV3 735 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 KLK4Q9Y5K2 254 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 AK5Q9Y6K8 562 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 TMEM120BA0PK00 339 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 PRAMEF4O60810 478 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 PRKAA2P54646 552 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 PRAMEF9Q5VWM5 478 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 RNF44Q7L0R7 432 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 DNAJC22Q8N4W6 341 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ABHD11Q8NFV4 315 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 MGARPQ8TDB4 240 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 USP7Q93009 1102 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ZNF501Q96CX3 271 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-224ENST00000483359 CDK15Q96Q40 435 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 NOL11Q9H8H0 719 aaKnown RBP17.09■□□□□ 0.33
CPNE1-224ENST00000483359 IPPKQ9H8X2 491 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 ZBTB26Q9HCK0 441 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 STARD5Q9NSY2 213 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 GPRC5BQ9NZH0 403 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 NEUROG3Q9Y4Z2 214 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 NCOR2Q9Y618 2525 aa17.09■□□□□ 0.33
CPNE1-224ENST00000483359 LOC105369274A0A096LPK9 316 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 LOC102723532A0A0G2JNH3 316 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 TRABD2BA6NFA1 517 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 PRPF4O43172 522 aaKnown RBP eCLIP17.08■□□□□ 0.332e-8■□□□□ 11.3
CPNE1-224ENST00000483359 EIF2S1P05198 315 aaKnown RBP17.08■□□□□ 0.33
CPNE1-224ENST00000483359 EZRP15311 586 aaKnown RBP17.08■□□□□ 0.33
CPNE1-224ENST00000483359 GABRA4P48169 554 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 MC2RQ01718 297 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 IRF8Q02556 426 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 CHIT1Q13231 466 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 SLBPQ14493 270 aaKnown RBP eCLIP17.08■□□□□ 0.33
CPNE1-224ENST00000483359 UNC50Q53HI1 259 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 PRAMEF17Q5VTA0 474 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 FBXO42Q6P3S6 717 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 SLCO4C1Q6ZQN7 724 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 MCATQ8IVS2 390 aaKnown RBP17.08■□□□□ 0.33
CPNE1-224ENST00000483359 OR4N4Q8N0Y3 316 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 OR52B6Q8NGF0 335 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 OR1L3Q8NH93 324 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 ATP6V1E2Q96A05 226 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 CCDC126Q96EE4 140 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 OXSMQ9NWU1 459 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 PILRAQ9UKJ1 303 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 RARRES3Q9UL19 164 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 B3GALT1Q9Y5Z6 326 aa17.08■□□□□ 0.33
CPNE1-224ENST00000483359 WDR91A4D1P6 747 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 B4E171 279 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 PPP6CO00743 305 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 KATNA1O75449 491 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 TIAF1O95411 115 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 C1GALT1C1LP0DN25 315 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 CD22P20273 847 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 IMPDH1P20839 514 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 HRH2P25021 359 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 ALDH3A1P30838 453 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms