RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 RIPK3Q9Y572 518 aa3.35□□□□□ -1.87
CLCC1-209ENST00000482889 CLCA3PQ9Y6N3 262 aa3.35□□□□□ -1.87
CLCC1-209ENST00000482889 ANTXRLA6NF34 631 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 C15orf62A8K5M9 175 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 KPNA7A9QM74 516 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 HNRNPCL2B2RXH8 293 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 CACNB4O00305 520 aaPredicted RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 BUD23O43709 281 aaKnown RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 PRDM1O75626 825 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 PDGFBP01127 241 aaPredicted RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 HOXC6P09630 235 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 NUDT17P0C025 328 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TMEM191BP0C7N4 346 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 GHRP10912 638 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 CD59P13987 128 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 FERP16591 822 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 EPHA2P29317 976 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 AHRP35869 848 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 KRTAP10-11P60412 298 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 FKBP1BP68106 108 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 HTD2P86397 168 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 ARHGAP1Q07960 439 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 KARSQ15046 597 aaKnown RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 GPR33Q49SQ1 333 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TAF1BQ53T94 588 aaPredicted RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TOR1AIP1Q5JTV8 583 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TOM1L2Q6ZVM7 507 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 MARK2Q7KZI7 788 aaKnown RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 LONP2Q86WA8 852 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 NUDT13Q86X67 352 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 LRTM2Q8N967 370 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TMEM185AQ8NFB2 350 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 OR1J1Q8NGS3 322 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 SCARB1Q8WTV0 552 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 N4BP2L2Q92802 583 aaPredicted RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TMEM186Q96B77 213 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 NAF1Q96HR8 494 aaKnown RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 RBM41Q96IZ5 413 aaKnown RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 PKP2Q99959 881 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 DDX50Q9BQ39 737 aaKnown RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 ANP32EQ9BTT0 268 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 NTMT1Q9BV86 223 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 CDK19Q9BWU1 502 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 LAT2Q9GZY6 243 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 ACTL8Q9H568 366 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 SDR39U1Q9NRG7 319 aaPredicted RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 SLC38A7Q9NVC3 462 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TAS2R3Q9NYW6 316 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 PKD2L2Q9NZM6 624 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 NDUFA13Q9P0J0 144 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 MALT1Q9UDY8 824 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 PSORS1C1Q9UIG5 152 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 SH3BGRL2Q9UJC5 107 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 PCDHA7Q9UN72 937 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 AGTPBP1Q9UPW5 1226 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 ZNF510Q9Y2H8 683 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 RRP15Q9Y3B9 282 aaKnown RBP3.34□□□□□ -1.87
CLCC1-209ENST00000482889 TRIM17Q9Y577 477 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 ATP8B3O60423 1300 aa3.34□□□□□ -1.87
CLCC1-209ENST00000482889 RNF103-CHMP3A0A140T963 221 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 MAGEB16A2A368 324 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 RNF103O00237 685 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 CTSVO60911 334 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 RNASEH1O60930 286 aaKnown RBP3.33□□□□□ -1.88
CLCC1-209ENST00000482889 IFNB1P01574 187 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 CRYABP02511 175 aaKnown RBP3.33□□□□□ -1.88
CLCC1-209ENST00000482889 TPM2P07951 284 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 ACAA1P09110 424 aaPredicted RBP3.33□□□□□ -1.88
CLCC1-209ENST00000482889 FUT1P19526 365 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 MSH3P20585 1137 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 CA4P22748 312 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 GJB2P29033 226 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 IER3P46695 156 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 CNN1P51911 297 aaKnown RBP3.33□□□□□ -1.88
CLCC1-209ENST00000482889 GAS1P54826 345 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 CDH11P55287 796 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 SRP54P61011 504 aaKnown RBP3.33□□□□□ -1.88
CLCC1-209ENST00000482889 TUBA1BP68363 451 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 GALK2Q01415 458 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 SULT2A1Q06520 285 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 SQLEQ14534 574 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 HERC3Q15034 1050 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 CEBPEQ15744 281 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 SLC25A53Q5H9E4 307 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 OR4A47Q6IF82 309 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 KLHL10Q6JEL2 608 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 ZNF549Q6P9A3 640 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 PLEKHM3Q6ZWE6 761 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 ADGRD2Q7Z7M1 963 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 AMIGO1Q86WK6 493 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 TMEM126BQ8IUX1 230 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 ZC3H3Q8IXZ2 948 aaKnown RBP3.33□□□□□ -1.88
CLCC1-209ENST00000482889 DNAJC22Q8N4W6 341 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 SMYD1Q8NB12 490 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 EXOC6Q8TAG9 804 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 CKAP2Q8WWK9 683 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 SAMD8Q96LT4 415 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 IWS1Q96ST2 819 aa3.33□□□□□ -1.88
CLCC1-209ENST00000482889 PRMT1Q99873 361 aaKnown RBP3.33□□□□□ -1.88
CLCC1-209ENST00000482889 TRMT61BQ9BVS5 477 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms