RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ZBTB11O95625 1053 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-212ENST00000480461 EBLN1P0CF75 366 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 CCT5P48643 541 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 ALDH18A1P54886 795 aaKnown RBP11.74□□□□□ -0.53
TRA2B-212ENST00000480461 HSD11B2P80365 405 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 MC2RQ01718 297 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 SETDB1Q15047 1291 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 GPR19Q15760 415 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 CATSPEREQ5SY80 951 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 BROXQ5VW32 411 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 PRAMEF13Q5VWM6 474 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 CAPN13Q6MZZ7 669 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-212ENST00000480461 LCTLQ6UWM7 567 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 AGBL5Q8NDL9 886 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 OR4K1Q8NGD4 311 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 NEIL2Q969S2 332 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 ZUFSPQ96AP4 578 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 TLCD1Q96CP7 247 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 RNF31Q96EP0 1072 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 SPNS1Q9H2V7 528 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 MRPS30Q9NP92 439 aaKnown RBP11.74□□□□□ -0.53
TRA2B-212ENST00000480461 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-212ENST00000480461 MKS1Q9NXB0 559 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 GRID1Q9ULK0 1009 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 BTRCQ9Y297 605 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 LOXL2Q9Y4K0 774 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 KIF26BQ2KJY2 2108 aa11.74□□□□□ -0.53
TRA2B-212ENST00000480461 CCDC187A0A096LP49 1063 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 LOC105369274A0A096LPK9 316 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 LOC102723532A0A0G2JNH3 316 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 OR2A25A4D2G3 310 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 SYCE1LA8MT33 242 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 A8MT66 165 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 TMX2-CTNND1H3BSU7 103 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 PLD2O14939 933 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 LCMT2O60294 686 aaKnown RBP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 GLRA3O75311 464 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 STK16O75716 305 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 WDR47O94967 919 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CDH1P12830 882 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CMPK1P30085 196 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CSTF2P33240 577 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 SNRPNP63162 240 aaKnown RBP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CSNK1G2P78368 415 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 PCBP2Q15366 365 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 C3orf38Q5JPI3 329 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 PRAMEF17Q5VTA0 474 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 SLCO4C1Q6ZQN7 724 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 KMT5CQ86Y97 462 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 PLD3Q8IV08 490 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 OR4N4Q8N0Y3 316 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CNPY4Q8N129 248 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CARFQ8N187 725 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 PTGR2Q8N8N7 351 aaPredicted RBP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 C19orf47Q8N9M1 422 aaKnown RBP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 ZNF740Q8NDX6 193 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 ABHD11Q8NFV4 315 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 TCP10LQ8TDR4 215 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 UBTD2Q8WUN7 234 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 GRAMD1AQ96CP6 724 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 TCTN2Q96GX1 697 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 APOPT1Q96IL0 206 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 TSNARE1Q96NA8 513 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 NSUN5Q96P11 429 aaKnown RBP11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CMKLR1Q99788 373 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CTRCQ99895 268 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 SH3GL2Q99962 352 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 PLCD4Q9BRC7 762 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 CHRNA10Q9GZZ6 450 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 ZMYND15Q9H091 742 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 VIPAS39Q9H9C1 493 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 ZBTB26Q9HCK0 441 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 BSNQ9UPA5 3926 aa11.73□□□□□ -0.53
TRA2B-212ENST00000480461 A0A1B0GTL3 188 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 C9orf172C9J069 976 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 E2F3O00716 465 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 CCNT2O60583 730 aaKnown RBP11.72□□□□□ -0.53
TRA2B-212ENST00000480461 TIAF1O95411 115 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 GFAPP14136 432 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 CD22P20273 847 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 CCND1P24385 295 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
TRA2B-212ENST00000480461 EEF1DP29692 281 aaKnown RBP11.72□□□□□ -0.53
TRA2B-212ENST00000480461 ETV4P43268 484 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 PRKAA2P54646 552 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 ABATP80404 500 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 MEF2AQ02078 507 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-212ENST00000480461 DEFB110Q30KQ9 67 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 TTMPQ5BVD1 217 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 FRMPD2BQ6IN97 320 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 FOXR1Q6PIV2 292 aa11.72□□□□□ -0.53
TRA2B-212ENST00000480461 NXPE4Q6UWF7 544 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms