RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 SEPHS1P49903 392 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CLDN6P56747 220 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CFHR1Q03591 330 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 PRDX1Q06830 199 aaKnown RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 DOC2AQ14183 400 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 DMRTA1Q5VZB9 504 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 TMPRSS9Q7Z410 1059 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 FAM129CQ86XR2 697 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 TRIM42Q8IWZ5 723 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 RBM12BQ8IXT5 1001 aaKnown RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 LRRC34Q8IZ02 419 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 FAM181AQ8N9Y4 354 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 AVL9Q8NBF6 648 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 RCBTB1Q8NDN9 531 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 OR6Y1Q8NGX8 325 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 METTL6Q8TCB7 284 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 UBTD2Q8WUN7 234 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 ZFPM2Q8WW38 1151 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SLC5A11Q8WWX8 675 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SORT1Q99523 831 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 MAP3K3Q99759 626 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 MACROD1Q9BQ69 325 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 KCNH6Q9H252 994 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SPNS1Q9H2V7 528 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 FARSBQ9NSD9 589 aaKnown RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 THAP1Q9NVV9 213 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 PTGDR2Q9Y5Y4 395 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 ARID1BQ8NFD5 2236 aaPredicted RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 A0A1W2PQM1 296 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SLC9B1P1A6NJY1 282 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 DUX1O43812 170 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 PRICKLE3O43900 615 aaPredicted RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 NPHS1O60500 1241 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 LRP3O75074 770 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SKAP2O75563 359 aaPredicted RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 CLDN9O95484 217 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 MLYCDO95822 493 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 OTCP00480 354 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SERPIND1P05546 499 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CCNYL3P0C7X3 344 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 PCNAP12004 261 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CKMT2P17540 419 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CD22P20273 847 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CCND1P24385 295 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CSF2RBP32927 897 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CYP4F2P78329 520 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 CYP4F3Q08477 520 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 TRAF3Q13114 568 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SLC14A1Q13336 389 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SLBPQ14493 270 aaKnown RBP eCLIP6.18□□□□□ -1.42
HERC4-210ENST00000480158 KIR2DS3Q14952 304 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 RBBP5Q15291 538 aaKnown RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 PDCD2Q16342 344 aaPredicted RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 INAVAQ3KP66 663 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 VWA5B1Q5TIE3 1220 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 KLHL35Q6PF15 583 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SPESP1Q6UW49 350 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 LCTLQ6UWM7 567 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 DBX2Q6ZNG2 339 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 SLCO4C1Q6ZQN7 724 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 GPRIN3Q6ZVF9 776 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 DEFB124Q8NES8 71 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 AGAP11Q8TF27 550 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 MTERF1Q99551 399 aaKnown RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 PLCD4Q9BRC7 762 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 HAUS8Q9BT25 410 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 C1QTNF3Q9BXJ4 246 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 ILKAPQ9H0C8 392 aaPredicted RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 EML4Q9HC35 981 aaKnown RBP6.18□□□□□ -1.42
HERC4-210ENST00000480158 SLC6A20Q9NP91 592 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 BTRCQ9Y297 605 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 TRAF6Q9Y4K3 522 aa6.18□□□□□ -1.42
HERC4-210ENST00000480158 IGHV5-51A0A0C4DH38 117 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 ATP6AP2A0A1C7CYW4 349 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 LILRA5A6NI73 299 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 TMEM114B3SHH9 223 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 PROB1E7EW31 1015 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 OR1F1O43749 312 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 GFRA3O60609 400 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 SNNO75324 88 aaPredicted RBP6.17□□□□□ -1.42
HERC4-210ENST00000480158 H2AFYO75367 372 aaKnown RBP6.17□□□□□ -1.42
HERC4-210ENST00000480158 ATP6AP2O75787 350 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 ESRRBO95718 433 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 JUNP05412 331 aaKnown RBP6.17□□□□□ -1.42
HERC4-210ENST00000480158 C1GALT1C1LP0DN25 315 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 HGFP14210 728 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 ST6GAL1P15907 406 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 CMPK1P30085 196 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 HNF4AP41235 474 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 GPR3P46089 330 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 DUSP3P51452 185 aaPredicted RBP6.17□□□□□ -1.42
HERC4-210ENST00000480158 OCRLQ01968 901 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 KCNAB1Q14722 419 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 ZRSR2Q15696 482 aaKnown RBP6.17□□□□□ -1.42
HERC4-210ENST00000480158 DEFB110Q30KQ9 67 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 NXPE4Q6UWF7 544 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 MTERF4Q7Z6M4 381 aaKnown RBP6.17□□□□□ -1.42
HERC4-210ENST00000480158 CRLF3Q8IUI8 442 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 DDIASQ8IXT1 998 aa6.17□□□□□ -1.42
HERC4-210ENST00000480158 FLVCR1-AS1Q8TAF5 88 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms