RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ARSGQ96EG1 525 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 RNFT2Q96EX2 444 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 DUS3LQ96G46 650 aaKnown RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 PLEKHA8Q96JA3 519 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF514Q96K75 400 aaPredicted RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 KLHL32Q96NJ5 620 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 DGAT2Q96PD7 388 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 RANBP9Q96S59 729 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 CCDC28BQ9BUN5 200 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 MLST8Q9BVC4 326 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 CHID1Q9BWS9 393 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 ALOXE3Q9BYJ1 711 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 UBXN6Q9BZV1 441 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 FTOQ9C0B1 505 aaKnown RBP eCLIP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 FAM192AQ9GZU8 254 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 RACGAP1Q9H0H5 632 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 OSGEPL1Q9H4B0 414 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 RGCCQ9H4X1 137 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 PALMDQ9NP74 551 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 CNNM1Q9NRU3 951 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC6A13Q9NSD5 602 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 RRP7BPQ9NSQ0 103 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 DNAJC17Q9NVM6 304 aaKnown RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 P4HTMQ9NXG6 502 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 WSB2Q9NYS7 404 aaPredicted RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 PLEK2Q9NYT0 353 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 SH3BP4Q9P0V3 963 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 NYAP2Q9P242 653 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 LRIT1Q9P2V4 623 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 HSFX1Q9UBD0 423 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 CTNNAL1Q9UBT7 734 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC25A10Q9UBX3 287 aaPredicted RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 HAO1Q9UJM8 370 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF229Q9UJW7 825 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 MAN1B1Q9UKM7 699 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 ZDHHC8Q9ULC8 765 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC45A2Q9UMX9 530 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 CDYLQ9Y232 598 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 MTO1Q9Y2Z2 717 aaKnown RBP3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 IFT52Q9Y366 437 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF175Q9Y473 711 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 LIPGQ9Y5X9 500 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 HS3ST4Q9Y661 456 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 NCAPD2Q15021 1401 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 PTPRCP08575 1304 aa3.42□□□□□ -1.86
FNDC3B-209ENST00000478016 PHLPP1O60346 1717 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TMEM131LA2VDJ0 1609 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 KIF24Q5T7B8 1368 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TMEM2Q9UHN6 1383 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 BTBD17A6NE02 478 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CFAP73A6NFT4 308 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF233A6NK53 670 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SAC3D1A6NKF1 404 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ZNF785A8K8V0 405 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 C12orf71A8MTZ7 269 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 MYO1GB0I1T2 1018 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TCP11X1B4DZS4 312 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 E7ESA3 106 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 QSOX1O00391 747 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CYR61O00622 381 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 DCLK1O15075 740 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GRID2O43424 1007 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 HBP1O60381 514 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TOM1O60784 492 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CNTN5O94779 1100 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 DEXIO95424 95 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 MATN4O95460 622 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RAB3DO95716 219 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 DHFRP00374 187 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SERPINA3P01011 423 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 FSHBP01225 129 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 IL1BP01584 269 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 GNAI2P04899 355 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CD3GP09693 182 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CCL2P13500 99 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 AKR1A1P14550 325 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 AREGP15514 252 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ERCC2P18074 760 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PTNP21246 168 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CCNOP22674 350 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CD27P26842 260 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 IFNA8P32881 189 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ICAM3P32942 547 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CYP2C18P33260 490 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 ARL1P40616 181 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 FRKP42685 505 aaPredicted RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SLC1A1P43005 524 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PAFAH1B1P43034 410 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 AP1S2P56377 157 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SOX10P56693 466 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 RPL7AP62424 266 aaKnown RBP3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SKP1P63208 163 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 PPP2R2BQ00005 443 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 SP2Q02086 613 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CACNG1Q06432 222 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 CYP24A1Q07973 514 aa3.41□□□□□ -1.86
FNDC3B-209ENST00000478016 TROAPQ12815 778 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms